RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 ELMOD1Q8N336 334 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 CELF5Q8N6W0 485 aaKnown RBP13.4□□□□□ -0.26
TTC3-221ENST00000488522 APPL2Q8NEU8 664 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 FBXO18Q8NFZ0 1043 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 DDX12PQ92771 950 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 E2F7Q96AV8 911 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 C8orf76Q96K31 380 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 DRC1Q96MC2 740 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 ACAP3Q96P50 834 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 TIPINQ9BVW5 301 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 LRRC3Q9BY71 257 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 GPR88Q9GZN0 384 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 POLD4Q9HCU8 107 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 LRWD1Q9UFC0 647 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 PCDHB8Q9UN66 801 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 NUB1Q9Y5A7 615 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 PIAS3Q9Y6X2 628 aa13.4□□□□□ -0.26
TTC3-221ENST00000488522 NUP210Q8TEM1 1887 aaPredicted RBP13.4□□□□□ -0.26
TTC3-221ENST00000488522 KIF26AQ9ULI4 1882 aaPredicted RBP13.4□□□□□ -0.26
TTC3-221ENST00000488522 HIP1RO75146 1068 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 TOM1L1O75674 476 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 OAZ2O95190 189 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 VNN2O95498 520 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 GUCY2CP25092 1073 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 LRPAP1P30533 357 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 GUCY1B3Q02153 619 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 FCHO2Q0JRZ9 810 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 SLC10A6Q3KNW5 377 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 C1orf186Q6ZWK4 172 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 TMC8Q8IU68 726 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 HS6ST3Q8IZP7 471 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 KCTD17Q8N5Z5 321 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 SNX29Q8TEQ0 813 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 SPIRE2Q8WWL2 714 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 FAM3CQ92520 227 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 C18orf25Q96B23 403 aaPredicted RBP13.39□□□□□ -0.27
TTC3-221ENST00000488522 ZSWIM3Q96MP5 696 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 ASAH2Q9NR71 780 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 GMEB2Q9UKD1 530 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 CDV3Q9UKY7 258 aaKnown RBP13.39□□□□□ -0.27
TTC3-221ENST00000488522 YIPF1Q9Y548 306 aa13.39□□□□□ -0.27
TTC3-221ENST00000488522 CNOT1A5YKK6 2376 aaKnown RBP13.39□□□□□ -0.27
TTC3-221ENST00000488522 CCDC169A6NNP5 214 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 LAD1O00515 517 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 CHADO15335 359 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 RETP07949 1114 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 U2AF2P26368 475 aaKnown RBP eCLIP13.38□□□□□ -0.274e-6■□□□□ 8.3
TTC3-221ENST00000488522 GDI1P31150 447 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 HOXA6P31267 233 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 MCM4P33991 863 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 PRPHP41219 470 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 OSTNP61366 133 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 MCL1Q07820 350 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 TWF1Q12792 350 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 PTGDRQ13258 359 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 GAS6Q14393 721 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 NOLC1Q14978 699 aaKnown RBP eCLIP13.38□□□□□ -0.27
TTC3-221ENST00000488522 ZBTB6Q15916 424 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 HYIQ5T013 277 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 RINT1Q6NUQ1 792 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 ZPBP2Q6X784 338 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 SPEM1Q8N4L4 309 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 SHKBP1Q8TBC3 707 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 ZSCAN18Q8TBC5 510 aaPredicted RBP13.38□□□□□ -0.27
TTC3-221ENST00000488522 ZNF512Q96ME7 567 aaPredicted RBP13.38□□□□□ -0.27
TTC3-221ENST00000488522 CNTNAP3BQ96NU0 1288 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 RUSC1Q9BVN2 902 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 CNTNAP3Q9BZ76 1288 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 LMAN1LQ9HAT1 526 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 PLEKHA5Q9HAU0 1116 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 KMT5AQ9NQR1 393 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 KCNG1Q9UIX4 513 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 NDRG2Q9UN36 371 aaKnown RBP13.38□□□□□ -0.27
TTC3-221ENST00000488522 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 CHD6Q8TD26 2715 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 MYH11P35749 1972 aa13.38□□□□□ -0.27
TTC3-221ENST00000488522 TSC2P49815 1807 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 TTC26A0AVF1 554 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 E9PMD0 336 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 ZNF263O14978 683 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 ADRB2P07550 413 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 CYP3A5P20815 502 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 WEE1P30291 646 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 CNR2P34972 360 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 VIPR2P41587 438 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 ARPP19P56211 112 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 PLD1Q13393 1074 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 RNF19BQ6ZMZ0 732 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 KCNK18Q7Z418 384 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 TMEM161BQ8NDZ6 487 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 NETO1Q8TDF5 533 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 MMTAG2Q9BU76 263 aaKnown RBP13.37□□□□□ -0.27
TTC3-221ENST00000488522 MKNK1Q9BUB5 465 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 DNAJC25Q9H1X3 360 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 C8orf33Q9H7E9 229 aaPredicted RBP13.37□□□□□ -0.27
TTC3-221ENST00000488522 HSFX1Q9UBD0 423 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 TUBGCP4Q9UGJ1 667 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 RAB23Q9ULC3 237 aa13.37□□□□□ -0.27
TTC3-221ENST00000488522 USP18Q9UMW8 372 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms