RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PCDHGA8Q9Y5G5 932 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 PCDHGA7Q9Y5G6 932 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 PCDHGA6Q9Y5G7 932 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 PCDHGA3Q9Y5H0 932 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 VWC2LB2RUY7 222 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 ADM5C9JUS6 153 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 CDK4P11802 303 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 HNRNPMP52272 730 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMC4-219ENST00000487747 CDC42EP1Q00587 391 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 FPGSQ05932 587 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 C3orf36Q3SXR2 165 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 PABPC1LQ4VXU2 614 aaKnown RBP5.75□□□□□ -1.49
SMC4-219ENST00000487747 ZNF788Q6ZQV5 615 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 RSPH3Q86UC2 560 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 C1orf162Q8NEQ5 155 aaPredicted RBP5.75□□□□□ -1.49
SMC4-219ENST00000487747 IL17RDQ8NFM7 739 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 NAF1Q96HR8 494 aaKnown RBP5.75□□□□□ -1.49
SMC4-219ENST00000487747 FBXL20Q96IG2 436 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 UROC1Q96N76 676 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 DMRTA2Q96SC8 542 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 HEPHQ9BQS7 1158 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 CPNE5Q9HCH3 593 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 INTS13Q9NVM9 706 aa5.75□□□□□ -1.49
SMC4-219ENST00000487747 WIPF3A6NGB9 483 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 DNAJC9-AS1A6NH13 148 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 MPPED1O15442 326 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 HTRA2O43464 458 aaPredicted RBP5.74□□□□□ -1.49
SMC4-219ENST00000487747 PROM1O43490 865 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 PROP1O75360 226 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 SLC43A1O75387 559 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 MT-CO1P00395 513 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 ABCG1P45844 678 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 RPS7P62081 194 aaKnown RBP5.74□□□□□ -1.49
SMC4-219ENST00000487747 DYRK1AQ13627 763 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 TMPRSS9Q7Z410 1059 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 CLNKQ7Z7G1 428 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 DDX42Q86XP3 938 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMC4-219ENST00000487747 TOR1AIP2Q8NFQ8 470 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 MYCBPAPQ8TBZ2 947 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 KAT5Q92993 513 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 MRGPRX4Q96LA9 322 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 SLC5A4Q9NY91 659 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 JKAMPQ9P055 326 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 PCDHB1Q9Y5F3 818 aa5.74□□□□□ -1.49
SMC4-219ENST00000487747 CD1AP06126 327 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 CHRM2P08172 466 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 PPP3CBP16298 524 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 ACAP2Q15057 778 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 ATP2B3Q16720 1220 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 TSTD2Q5T7W7 516 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 MIGA2Q7L4E1 593 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 ADGRG5Q8IZF4 528 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 CFAP52Q8N1V2 620 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 PDPRQ8NCN5 879 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 SLC17A8Q8NDX2 589 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 ANKS1AQ92625 1134 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 TIMP4Q99727 224 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 IMPG2Q9BZV3 1241 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 ST3GAL5Q9UNP4 418 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 ENTPD2Q9Y5L3 495 aa5.73□□□□□ -1.49
SMC4-219ENST00000487747 CCDC154A6NI56 674 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 LINC00473A8K010 186 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 E9PLN8 166 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 MTHFD1P11586 935 aaKnown RBP5.72□□□□□ -1.49
SMC4-219ENST00000487747 ITPKBP27987 946 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 GRIA3P42263 894 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 ATXN1P54253 815 aaKnown RBP5.72□□□□□ -1.49
SMC4-219ENST00000487747 SRSF4Q08170 494 aaKnown RBP5.72□□□□□ -1.49
SMC4-219ENST00000487747 ZNF844Q08AG5 666 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 TXNRD1Q16881 649 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 AMIGO2Q86SJ2 522 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 DDB2Q92466 427 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 DPF1Q92782 380 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 FAXDC2Q96IV6 333 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 VKORC1Q9BQB6 163 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 PACSIN1Q9BY11 444 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 MRPS18AQ9NVS2 196 aaKnown RBP5.72□□□□□ -1.49
SMC4-219ENST00000487747 MKS1Q9NXB0 559 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 RNF7Q9UBF6 113 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 SERPINB13Q9UIV8 391 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 ADAM21Q9UKJ8 722 aa5.72□□□□□ -1.49
SMC4-219ENST00000487747 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.72□□□□□ -1.49
SMC4-219ENST00000487747 MANSC4A6NHS7 340 aaPredicted RBP5.71□□□□□ -1.5
SMC4-219ENST00000487747 ANXA11P50995 505 aaKnown RBP5.71□□□□□ -1.5
SMC4-219ENST00000487747 TLE1Q04724 770 aa5.71□□□□□ -1.5
SMC4-219ENST00000487747 ABCB5Q2M3G0 1257 aa5.71□□□□□ -1.5
SMC4-219ENST00000487747 EGFLAMQ63HQ2 1017 aa5.71□□□□□ -1.5
SMC4-219ENST00000487747 ZNF365Q70YC5 407 aa5.71□□□□□ -1.5
SMC4-219ENST00000487747 HDAC10Q969S8 669 aa5.71□□□□□ -1.5
SMC4-219ENST00000487747 SARAFQ96BY9 339 aa5.71□□□□□ -1.5
SMC4-219ENST00000487747 CLPTM1LQ96KA5 538 aa5.71□□□□□ -1.5
SMC4-219ENST00000487747 CCDC8Q9H0W5 538 aaPredicted RBP5.71□□□□□ -1.5
SMC4-219ENST00000487747 SAP30BPQ9UHR5 308 aaKnown RBP5.71□□□□□ -1.5
SMC4-219ENST00000487747 CCDC195A0A1B0GUA6 201 aa5.7□□□□□ -1.5
SMC4-219ENST00000487747 FZD9O00144 591 aa5.7□□□□□ -1.5
SMC4-219ENST00000487747 TOR1BO14657 336 aa5.7□□□□□ -1.5
SMC4-219ENST00000487747 SGTAO43765 313 aa5.7□□□□□ -1.5
SMC4-219ENST00000487747 WT1P19544 449 aaPredicted RBP5.7□□□□□ -1.5
SMC4-219ENST00000487747 EXOSC10Q01780 885 aaKnown RBP5.7□□□□□ -1.5
SMC4-219ENST00000487747 PTPRRQ15256 657 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms