RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 SLC30A4O14863 429 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 XPOTO43592 962 aaKnown RBP13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 MCM4P33991 863 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 PRPHP41219 470 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 CCR2P41597 374 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 AARSP49588 968 aaKnown RBP eCLIP13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 NEK4P51957 841 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 EPHB3P54753 998 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 TWF1Q12792 350 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 STRN3Q13033 797 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 PTGDRQ13258 359 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 MYBPC2Q14324 1141 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 CSRP2Q16527 193 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 C1orf186Q6ZWK4 172 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 TAS1R3Q7RTX0 852 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 LONP2Q86WA8 852 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 RALGPS2Q86X27 583 aaPredicted RBP13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 DAW1Q8N136 415 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 CEP120Q8N960 986 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 ZSCAN18Q8TBC5 510 aaPredicted RBP13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 CSGALNACT1Q8TDX6 532 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 TBC1D32Q96NH3 1257 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 CEP72Q9P209 647 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 NDRG2Q9UN36 371 aaKnown RBP13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 LIMCH1Q9UPQ0 1083 aa13.02□□□□□ -0.33
LDLRAP1-206ENST00000485476 CCDC163A0A0D9SF12 145 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 HEPACAM2A8MVW5 462 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 HIP1RO75146 1068 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 ADRB1P08588 477 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 CLTAP09496 248 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 TYMPP19971 482 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 U2AF2P26368 475 aaKnown RBP eCLIP13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 ARPP19P56211 112 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 YWHAHQ04917 246 aaPredicted RBP13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 MCL1Q07820 350 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 GPR17Q13304 367 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 GRM2Q14416 872 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 SLC10A6Q3KNW5 377 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 RINT1Q6NUQ1 792 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 TSSK4Q6SA08 328 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 YAF2Q8IY57 180 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 SNX29Q8TEQ0 813 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 LOXL4Q96JB6 756 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 ZSWIM3Q96MP5 696 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 CNTNAP3BQ96NU0 1288 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 LRRC3Q9BY71 257 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 CNTNAP3Q9BZ76 1288 aa13.01□□□□□ -0.33
LDLRAP1-206ENST00000485476 SPTBN2O15020 2390 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 MYBPHLA2RUH7 354 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 SOBPA7XYQ1 873 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 CLDN3O15551 220 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 SLC26A4O43511 780 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 DTNBO60941 627 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 CPB1P15086 417 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 CCNE1P24864 410 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 ABCD1P33897 745 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 ALDH1A3P47895 512 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 OSTNP61366 133 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 SMARCB1Q12824 385 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 GNL2Q13823 731 aaKnown RBP13□□□□□ -0.33
LDLRAP1-206ENST00000485476 SIM2Q14190 667 aaPredicted RBP13□□□□□ -0.33
LDLRAP1-206ENST00000485476 PTPAQ15257 358 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 ZBTB6Q15916 424 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 ARHGAP29Q52LW3 1261 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 HYIQ5T013 277 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 RNF19BQ6ZMZ0 732 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 HAUS6Q7Z4H7 955 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 CD302Q8IX05 232 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 HS6ST3Q8IZP7 471 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 TMEM161BQ8NDZ6 487 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 SHKBP1Q8TBC3 707 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 C18orf25Q96B23 403 aaPredicted RBP13□□□□□ -0.33
LDLRAP1-206ENST00000485476 ZSCAN31Q96LW9 406 aaPredicted RBP13□□□□□ -0.33
LDLRAP1-206ENST00000485476 PARD6AQ9NPB6 346 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 UBQLN1Q9UMX0 589 aaKnown RBP13□□□□□ -0.33
LDLRAP1-206ENST00000485476 YIPF1Q9Y548 306 aa13□□□□□ -0.33
LDLRAP1-206ENST00000485476 TTC26A0AVF1 554 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 ADRB2P07550 413 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 MYL4P12829 197 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 PLS3P13797 630 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 VIPR2P41587 438 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 LIMK1P53667 647 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 GUCY1B3Q02153 619 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 MAPK7Q13164 816 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 TEAD2Q15562 447 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 DTHD1Q6ZMT9 781 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 USP37Q86T82 979 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 ITIH5Q86UX2 942 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 WDR5BQ86VZ2 330 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 TMC8Q8IU68 726 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 PSMG2Q969U7 264 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 POLD4Q9HCU8 107 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 SH2B1Q9NRF2 756 aaPredicted RBP12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 SEMA4GQ9NTN9 838 aa12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 LARSQ9P2J5 1176 aaKnown RBP12.99□□□□□ -0.33
LDLRAP1-206ENST00000485476 E9PMD0 336 aa12.98□□□□□ -0.33
LDLRAP1-206ENST00000485476 DPYSL4O14531 572 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms