RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 APBA1Q02410 837 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 WDR72Q3MJ13 1102 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 ZNF667Q5HYK9 610 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 CLP1Q92989 425 aaKnown RBP18.88■□□□□ 0.61
CHMP3-207ENST00000485465 TATDN2Q93075 761 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 NT5C1BQ96P26 610 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 AAASQ9NRG9 546 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 MARCH5Q9NX47 278 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 NUB1Q9Y5A7 615 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 LINC01553A4QN01 128 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 NT5C1B-RDH14C9J2C7 533 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 TADA2AO75478 443 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 ITGB1P05556 798 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 AARSP49588 968 aaKnown RBP eCLIP18.87■□□□□ 0.61
CHMP3-207ENST00000485465 KLHDC7AQ5VTJ3 777 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 PHLDB3Q6NSJ2 640 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 ARHGEF19Q8IW93 802 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 HASPINQ8TF76 798 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 FAM207AQ9NSI2 230 aaPredicted RBP18.87■□□□□ 0.61
CHMP3-207ENST00000485465 GDAP2Q9NXN4 497 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 NXF1Q9UBU9 619 aaKnown RBP18.87■□□□□ 0.61
CHMP3-207ENST00000485465 APEX2Q9UBZ4 518 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 ADAM28Q9UKQ2 775 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 POLIQ9UNA4 740 aa18.87■□□□□ 0.61
CHMP3-207ENST00000485465 NOL4O94818 638 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 P4HA1P13674 534 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 BRCC3P46736 316 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 TNNC1P63316 161 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 TIGD5Q53EQ6 642 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 TMEM173Q86WV6 379 aaPredicted RBP18.86■□□□□ 0.61
CHMP3-207ENST00000485465 VSTM4Q8IW00 320 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 SLC39A11Q8N1S5 342 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 NEK11Q8NG66 645 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 BCL7CQ8WUZ0 217 aaPredicted RBP18.86■□□□□ 0.61
CHMP3-207ENST00000485465 IGSF21Q96ID5 467 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 FAXDC2Q96IV6 333 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 SENP8Q96LD8 212 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 NIF3L1Q9GZT8 377 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 GANQ9H2C0 597 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 SPG21Q9NZD8 308 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 YBX2Q9Y2T7 364 aaKnown RBP18.86■□□□□ 0.61
CHMP3-207ENST00000485465 PCDHB12Q9Y5F1 795 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 SNX9Q9Y5X1 595 aa18.86■□□□□ 0.61
CHMP3-207ENST00000485465 CEP290O15078 2479 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 ITIH6Q6UXX5 1313 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 CYB561D2O14569 222 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 EPHB6O15197 1021 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 CA3P07451 260 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 PBX2P40425 430 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 RAB30Q15771 203 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 SPECC1LQ69YQ0 1117 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 GJB7Q6PEY0 223 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 DSTYKQ6XUX3 929 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 RRAGAQ7L523 313 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 PPM1KQ8N3J5 372 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 SUSD3Q96L08 255 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 PBX4Q9BYU1 374 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 UBE2TQ9NPD8 197 aaPredicted RBP18.85■□□□□ 0.61
CHMP3-207ENST00000485465 MSRAQ9UJ68 235 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 RWDD3Q9Y3V2 267 aa18.85■□□□□ 0.61
CHMP3-207ENST00000485465 I3L4J1 428 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 M0QZQ0 153 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 TRAPPC3O43617 180 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 ARHGEF15O94989 841 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 UCHL3P15374 230 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 TBXAS1P24557 533 aaPredicted RBP18.84■□□□□ 0.61
CHMP3-207ENST00000485465 PPM1AP35813 382 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 BMPR1AP36894 532 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 ASPAP45381 313 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 GCNT1Q02742 428 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 CUL2Q13617 745 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 IQCEQ6IPM2 695 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 LIMS2Q7Z4I7 341 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 FAM81BQ96LP2 452 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 MMS19Q96T76 1030 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 NUP58Q9BVL2 599 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 NAA15Q9BXJ9 866 aaKnown RBP18.84■□□□□ 0.61
CHMP3-207ENST00000485465 BCO2Q9BYV7 579 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 FBXL5Q9UKA1 691 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 DNAJC12Q9UKB3 198 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 DAAM1Q9Y4D1 1078 aa18.84■□□□□ 0.61
CHMP3-207ENST00000485465 SCN1AP35498 2009 aa18.83■□□□□ 0.61
CHMP3-207ENST00000485465 SF3B1O75533 1304 aaKnown RBP eCLIP18.83■□□□□ 0.61
CHMP3-207ENST00000485465 HUS1O60921 280 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 EFEMP2O95967 443 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 TRIM21P19474 475 aaKnown RBP18.83■□□□□ 0.6
CHMP3-207ENST00000485465 RFX1P22670 979 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 CDC25BP30305 580 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 CTNNB1P35222 781 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 MFAP3P55082 362 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 POLR2FP61218 127 aaKnown RBP18.83■□□□□ 0.6
CHMP3-207ENST00000485465 SOWAHAQ2M3V2 549 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 FIGNQ5HY92 759 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 FUT10Q6P4F1 479 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 SCARA5Q6ZMJ2 495 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 ENOSF1Q7L5Y1 443 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 DPH6Q7L8W6 267 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 TMC6Q7Z403 805 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 TOP6BLQ8N6T0 577 aa18.83■□□□□ 0.6
CHMP3-207ENST00000485465 APPL2Q8NEU8 664 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms