RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CLIC2O15247 247 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 EIF3DO15371 548 aaKnown RBP eCLIP13.29□□□□□ -0.28
MSH5-216ENST00000484309 KLRC4O43908 158 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 EXTL3O43909 919 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 TBC1D4O60343 1298 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 SEC24AO95486 1093 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 LDHAP00338 332 aaKnown RBP13.29□□□□□ -0.28
MSH5-216ENST00000484309 C1RP00736 705 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 CPB1P15086 417 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 AARSP49588 968 aaKnown RBP eCLIP13.29□□□□□ -0.28
MSH5-216ENST00000484309 CDR1P51861 262 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 NDUFA8P51970 172 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 LILRA4P59901 499 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 YWHAHQ04917 246 aaPredicted RBP13.29□□□□□ -0.28
MSH5-216ENST00000484309 EHHADHQ08426 723 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 SCARA3Q6AZY7 606 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 SLC8B1Q6J4K2 584 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 OTOP3Q7RTS5 596 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 USP37Q86T82 979 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 CBWD2Q8IUF1 395 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 ZDHHC14Q8IZN3 488 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 GPD1LQ8N335 351 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 FSIP1Q8NA03 581 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 ZNF507Q8TCN5 953 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 SCFD1Q8WVM8 642 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 ACSF2Q96CM8 615 aaPredicted RBP13.29□□□□□ -0.28
MSH5-216ENST00000484309 SENP8Q96LD8 212 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 MYADMQ96S97 322 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 TSPAN18Q96SJ8 248 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 PYM1Q9BRP8 204 aaKnown RBP13.29□□□□□ -0.28
MSH5-216ENST00000484309 SCAND2PQ9GZW5 306 aaPredicted RBP13.29□□□□□ -0.28
MSH5-216ENST00000484309 GOLPH3LQ9H4A5 285 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 CYP4F11Q9HBI6 524 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 PDE11AQ9HCR9 933 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 HCFC1R1Q9NWW0 138 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 HSPBP1Q9NZL4 362 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 HPSEQ9Y251 543 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 USTQ9Y2C2 406 aa13.29□□□□□ -0.28
MSH5-216ENST00000484309 ANO9A1A5B4 782 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 PRR33A8MZF0 331 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 PRRG1O14668 218 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 ABLIM3O94929 683 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 HNRNPA1P09651 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
MSH5-216ENST00000484309 ODC1P11926 461 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 ELF1P32519 619 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 SYKP43405 635 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 CYP2J2P51589 502 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 OVOS1Q6IE37 1185 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 TRIM67Q6ZTA4 783 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 ZNF461Q8TAF7 563 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 PGLYRP2Q96PD5 576 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 TMEM209Q96SK2 561 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 SORCS3Q9UPU3 1222 aa13.28□□□□□ -0.28
MSH5-216ENST00000484309 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.28□□□□□ -0.28
MSH5-216ENST00000484309 ZDBF2Q9HCK1 2354 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 PVALEFA0A1B0GWK0 134 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 TMEM221A6NGB7 291 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 M0R296 226 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 TGFB1I1O43294 461 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 XYLBO75191 536 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 PAPLNO95428 1278 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 LRG1P02750 347 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 ITGB3P05106 788 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 FSHRP23945 695 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 POLR2BP30876 1174 aaKnown RBP13.27□□□□□ -0.29
MSH5-216ENST00000484309 TAF6P49848 677 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 ADCY1Q08828 1119 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 KMT5BQ4FZB7 885 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 RNF19BQ6ZMZ0 732 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 HFE2Q6ZVN8 426 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 RDH13Q8NBN7 331 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 RSAD2Q8WXG1 361 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 ING5Q8WYH8 240 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 MTMR12Q9C0I1 747 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 AGPAT3Q9NRZ7 376 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 EXOC1Q9NV70 894 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 DNMT3BQ9UBC3 853 aaKnown RBP13.27□□□□□ -0.29
MSH5-216ENST00000484309 AGAP1Q9UPQ3 857 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 INSL5Q9Y5Q6 135 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 UBE4BO95155 1302 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 PTPRJQ12913 1337 aa13.27□□□□□ -0.29
MSH5-216ENST00000484309 ZNF638Q14966 1978 aaKnown RBP13.27□□□□□ -0.29
MSH5-216ENST00000484309 CYB561D2O14569 222 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 OBSL1O75147 1896 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 OAZ2O95190 189 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 VNN2O95498 520 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 KRT19P08727 400 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 TMEM191BP0C7N4 346 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 ATF2P15336 505 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 TYMPP19971 482 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 HOXA9P31269 272 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 POU5F1Q01860 360 aaKnown RBP13.26□□□□□ -0.29
MSH5-216ENST00000484309 SIGLEC14Q08ET2 396 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 BFSP1Q12934 665 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 STK4Q13043 487 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms