RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CDC42EP1Q00587 391 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 CLUL1Q15846 466 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 PABPC1LQ4VXU2 614 aaKnown RBP5.93□□□□□ -1.46
SCAF11-207ENST00000484275 TMPRSS9Q7Z410 1059 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 CLNKQ7Z7G1 428 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 AMOTL1Q8IY63 956 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 ADGRG5Q8IZF4 528 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 CNTD1Q8N815 330 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCAF11-207ENST00000484275 TMIEQ8NEW7 156 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 IL17RDQ8NFM7 739 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 ATL2Q8NHH9 583 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 MYCBPAPQ8TBZ2 947 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 FBXL20Q96IG2 436 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 DMRTA2Q96SC8 542 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 CPNE5Q9HCH3 593 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 LIMCH1Q9UPQ0 1083 aa5.93□□□□□ -1.46
SCAF11-207ENST00000484275 VWC2LB2RUY7 222 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 SLC43A1O75387 559 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 MTHFD1P11586 935 aaKnown RBP5.92□□□□□ -1.46
SCAF11-207ENST00000484275 WT1P19544 449 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-207ENST00000484275 ITPKBP27987 946 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 GRIA3P42263 894 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 HNRNPMP52272 730 aaKnown RBP eCLIP5.92□□□□□ -1.46
SCAF11-207ENST00000484275 RPS7P62081 194 aaKnown RBP5.92□□□□□ -1.46
SCAF11-207ENST00000484275 FPGSQ05932 587 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 DYRK1AQ13627 763 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 IL10RAQ13651 578 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 ATP2B3Q16720 1220 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 RSPH3Q86UC2 560 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 CFAP52Q8N1V2 620 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 TOR1AIP2Q8NFQ8 470 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 DPF1Q92782 380 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 SARAFQ96BY9 339 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 MRGPRX4Q96LA9 322 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 JKAMPQ9P055 326 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 USP35Q9P2H5 1018 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 RNF7Q9UBF6 113 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 IPPQ9Y573 584 aa5.92□□□□□ -1.46
SCAF11-207ENST00000484275 PCDHGA12O60330 932 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 CD1AP06126 327 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 ANXA11P50995 505 aaKnown RBP5.91□□□□□ -1.46
SCAF11-207ENST00000484275 TXNRD1Q16881 649 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 C3orf36Q3SXR2 165 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 TSTD2Q5T7W7 516 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 MIGA2Q7L4E1 593 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 GRASPQ7Z6J2 395 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-207ENST00000484275 C1orf162Q8NEQ5 155 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-207ENST00000484275 SSH1Q8WYL5 1049 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 ADAM21Q9UKJ8 722 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 PCDHB1Q9Y5F3 818 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 PCDHGA9Q9Y5G4 932 aaKnown RBP5.91□□□□□ -1.46
SCAF11-207ENST00000484275 PCDHGA8Q9Y5G5 932 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 PCDHGA7Q9Y5G6 932 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 PCDHGA6Q9Y5G7 932 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 PCDHGA3Q9Y5H0 932 aa5.91□□□□□ -1.46
SCAF11-207ENST00000484275 WDR27A2RRH5 827 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 LINC00473A8K010 186 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 E9PLN8 166 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 HTRA2O43464 458 aaPredicted RBP5.9□□□□□ -1.46
SCAF11-207ENST00000484275 CHRM2P08172 466 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 PPP3CBP16298 524 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 SRSF4Q08170 494 aaKnown RBP5.9□□□□□ -1.46
SCAF11-207ENST00000484275 ZNF844Q08AG5 666 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 PTPRRQ15256 657 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 PGM2L1Q6PCE3 622 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 ZNF365Q70YC5 407 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 PDPRQ8NCN5 879 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 FBXO41Q8TF61 875 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 VKORC1Q9BQB6 163 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 IMPG2Q9BZV3 1241 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 WDR26Q9H7D7 661 aa5.9□□□□□ -1.46
SCAF11-207ENST00000484275 CCDC195A0A1B0GUA6 201 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 CCDC151A5D8V7 595 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 MANSC4A6NHS7 340 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-207ENST00000484275 SGTAO43765 313 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 MT-CO1P00395 513 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 GPD1P21695 349 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 TLE1Q04724 770 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 NBPF8Q3BBV2 869 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 AMIGO2Q86SJ2 522 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 DDX42Q86XP3 938 aaKnown RBP eCLIP5.89□□□□□ -1.47
SCAF11-207ENST00000484275 DDB2Q92466 427 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 HDAC10Q969S8 669 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 PGBD1Q96JS3 809 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 PACSIN1Q9BY11 444 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 SLC5A4Q9NY91 659 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-207ENST00000484275 NEU2Q9Y3R4 380 aa5.89□□□□□ -1.47
SCAF11-207ENST00000484275 TOR1BO14657 336 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 ACAP2Q15057 778 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 C1QL2Q7Z5L3 287 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 SLC17A8Q8NDX2 589 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 SNX19Q92543 992 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 KAT5Q92993 513 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 CLPTM1LQ96KA5 538 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 ZNF778Q96MU6 729 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 PUS7LQ9H0K6 701 aaKnown RBP5.88□□□□□ -1.47
SCAF11-207ENST00000484275 KMT5AQ9NQR1 393 aa5.88□□□□□ -1.47
SCAF11-207ENST00000484275 MKS1Q9NXB0 559 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms