RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 NT5DC3Q86UY8 548 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 FAM228AQ86W67 206 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 CTAGE4Q8IX94 777 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 RAET1EQ8TD07 263 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 COG1Q8WTW3 980 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 GOLGA1Q92805 767 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 RPGRIP1Q96KN7 1286 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 ZMAT2Q96NC0 199 aaKnown RBP15.01□□□□□ -0.01
CLK3-204ENST00000483723 MMS19Q96T76 1030 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 CXCL16Q9H2A7 254 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 CYP3A43Q9HB55 503 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 CNTN3Q9P232 1028 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 RNF14Q9UBS8 474 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 GTF3C4Q9UKN8 822 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 POLIQ9UNA4 740 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 COG5Q9UP83 839 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 BUB1BO60566 1050 aaPredicted RBP15□□□□□ -0.01
CLK3-204ENST00000483723 FKTNO75072 461 aa15□□□□□ -0.01
CLK3-204ENST00000483723 KIF4AO95239 1232 aa15□□□□□ -0.01
CLK3-204ENST00000483723 CHRNA1P02708 482 aa15□□□□□ -0.01
CLK3-204ENST00000483723 KRT19P08727 400 aa15□□□□□ -0.01
CLK3-204ENST00000483723 WEE2P0C1S8 567 aa15□□□□□ -0.01
CLK3-204ENST00000483723 YARSP54577 528 aaKnown RBP15□□□□□ -0.01
CLK3-204ENST00000483723 CENPCQ03188 943 aa15□□□□□ -0.01
CLK3-204ENST00000483723 ITIH3Q06033 890 aa15□□□□□ -0.01
CLK3-204ENST00000483723 ARHGEF6Q15052 776 aa15□□□□□ -0.01
CLK3-204ENST00000483723 ELF2Q15723 593 aa15□□□□□ -0.01
CLK3-204ENST00000483723 PPP1R2P3Q6NXS1 205 aa15□□□□□ -0.01
CLK3-204ENST00000483723 KIF12Q96FN5 646 aa15□□□□□ -0.01
CLK3-204ENST00000483723 SAGE1Q9NXZ1 904 aa15□□□□□ -0.01
CLK3-204ENST00000483723 AGAP1Q9UPQ3 857 aa15□□□□□ -0.01
CLK3-204ENST00000483723 PIN4Q9Y237 131 aaKnown RBP15□□□□□ -0.01
CLK3-204ENST00000483723 M0QZ92 97 aa15□□□□□ -0.01
CLK3-204ENST00000483723 RECQL4O94761 1208 aa15□□□□□ -0.01
CLK3-204ENST00000483723 KCNE1P15382 129 aa15□□□□□ -0.01
CLK3-204ENST00000483723 POLR2BP30876 1174 aaKnown RBP15□□□□□ -0.01
CLK3-204ENST00000483723 NOMO3P69849 1222 aa15□□□□□ -0.01
CLK3-204ENST00000483723 RPS6KA1Q15418 735 aa15□□□□□ -0.01
CLK3-204ENST00000483723 WDR72Q3MJ13 1102 aa15□□□□□ -0.01
CLK3-204ENST00000483723 RNF180Q86T96 592 aa15□□□□□ -0.01
CLK3-204ENST00000483723 MCOLN2Q8IZK6 566 aa15□□□□□ -0.01
CLK3-204ENST00000483723 TMEM130Q8N3G9 435 aa15□□□□□ -0.01
CLK3-204ENST00000483723 GPR161Q8N6U8 529 aaKnown RBP15□□□□□ -0.01
CLK3-204ENST00000483723 SMG8Q8ND04 991 aaKnown RBP15□□□□□ -0.01
CLK3-204ENST00000483723 CYFIP2Q96F07 1278 aa15□□□□□ -0.01
CLK3-204ENST00000483723 HPDLQ96IR7 371 aa15□□□□□ -0.01
CLK3-204ENST00000483723 VCPIP1Q96JH7 1222 aa15□□□□□ -0.01
CLK3-204ENST00000483723 ZSWIM1Q9BR11 485 aa15□□□□□ -0.01
CLK3-204ENST00000483723 TSEN34Q9BSV6 310 aaKnown RBP15□□□□□ -0.01
CLK3-204ENST00000483723 SENP6Q9GZR1 1112 aaPredicted RBP15□□□□□ -0.01
CLK3-204ENST00000483723 SDCBP2Q9H190 292 aa15□□□□□ -0.01
CLK3-204ENST00000483723 NXF3Q9H4D5 531 aaKnown RBP15□□□□□ -0.01
CLK3-204ENST00000483723 AVENQ9NQS1 362 aaPredicted RBP15□□□□□ -0.01
CLK3-204ENST00000483723 CHST12Q9NRB3 414 aa15□□□□□ -0.01
CLK3-204ENST00000483723 UVRAGQ9P2Y5 699 aa15□□□□□ -0.01
CLK3-204ENST00000483723 CFHP08603 1231 aa14.99□□□□□ -0.01
CLK3-204ENST00000483723 GUCY2FP51841 1108 aa14.99□□□□□ -0.01
CLK3-204ENST00000483723 LHX8Q68G74 356 aa14.99□□□□□ -0.01
CLK3-204ENST00000483723 PHF13Q86YI8 300 aaPredicted RBP14.99□□□□□ -0.01
CLK3-204ENST00000483723 SLAIN1Q8ND83 568 aa14.99□□□□□ -0.01
CLK3-204ENST00000483723 WHAMMQ8TF30 809 aa14.99□□□□□ -0.01
CLK3-204ENST00000483723 HES6Q96HZ4 224 aa14.99□□□□□ -0.01
CLK3-204ENST00000483723 TRIM6Q9C030 488 aaPredicted RBP14.99□□□□□ -0.01
CLK3-204ENST00000483723 NXF1Q9UBU9 619 aaKnown RBP14.99□□□□□ -0.01
CLK3-204ENST00000483723 AMFRQ9UKV5 643 aa14.99□□□□□ -0.01
CLK3-204ENST00000483723 PCDHGC3Q9UN70 934 aa14.99□□□□□ -0.01
CLK3-204ENST00000483723 HES2Q9Y543 173 aa14.99□□□□□ -0.01
CLK3-204ENST00000483723 THAP12O43422 761 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 PAEPP09466 180 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 MYBL1P10243 752 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 P4HA1P13674 534 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 CD58P19256 250 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 CDH5P33151 784 aaPredicted RBP14.98□□□□□ -0.01
CLK3-204ENST00000483723 ACLYP53396 1101 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 PTP4A2Q12974 167 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 ITGA7Q13683 1181 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 TRIM71Q2Q1W2 868 aaKnown RBP14.98□□□□□ -0.01
CLK3-204ENST00000483723 FAM47CQ5HY64 1035 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 FAM26DQ5JW98 314 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 C11orf63Q6NUN7 778 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 PEX26Q7Z412 305 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 DAAM2Q86T65 1068 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 BEST2Q8NFU1 509 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 ZNF296Q8WUU4 475 aaPredicted RBP14.98□□□□□ -0.01
CLK3-204ENST00000483723 TRIM11Q96F44 468 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 PBKQ96KB5 322 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 CAPZA3Q96KX2 299 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 GOLPH3Q9H4A6 298 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 CTTNBP2NLQ9P2B4 639 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 UBQLN1Q9UMX0 589 aaKnown RBP14.98□□□□□ -0.01
CLK3-204ENST00000483723 IPPQ9Y573 584 aa14.98□□□□□ -0.01
CLK3-204ENST00000483723 SMIM28A0A1B0GU29 152 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 MOXD2PA6NHM9 499 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 CILPO75339 1184 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 RPS6KA5O75582 802 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 INHAP05111 366 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 ZSCAN20P17040 1043 aaPredicted RBP14.97□□□□□ -0.01
CLK3-204ENST00000483723 RAD23BP54727 409 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 CDH8P55286 799 aa14.97□□□□□ -0.01
CLK3-204ENST00000483723 INCA1Q0VD86 236 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms