RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 TMEM175Q9BSA9 504 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 ZFAND3Q9H8U3 227 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 IL21RQ9HBE5 538 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.37□□□□□ -1.23
CHD6-209ENST00000482596 A1L4Q6 167 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 SURF6O75683 361 aaKnown RBP7.36□□□□□ -1.23
CHD6-209ENST00000482596 POU2F2P09086 479 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 GJA1P17302 382 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 NLRP11P59045 1033 aaKnown RBP7.36□□□□□ -1.23
CHD6-209ENST00000482596 LINC00303Q3SY05 128 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 RTP2Q5QGT7 225 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 NAIF1Q69YI7 327 aaPredicted RBP7.36□□□□□ -1.23
CHD6-209ENST00000482596 GIMAP6Q6P9H5 292 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 RASSF3Q86WH2 238 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 YAF2Q8IY57 180 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 FAM177A1Q8N128 213 aaPredicted RBP7.36□□□□□ -1.23
CHD6-209ENST00000482596 MDGA1Q8NFP4 955 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 CEP76Q8TAP6 659 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 ZSCAN18Q8TBC5 510 aaPredicted RBP7.36□□□□□ -1.23
CHD6-209ENST00000482596 PNMA5Q96PV4 448 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 FAM193BQ96PV7 902 aaPredicted RBP7.36□□□□□ -1.23
CHD6-209ENST00000482596 KCTD15Q96SI1 283 aaPredicted RBP7.36□□□□□ -1.23
CHD6-209ENST00000482596 BCCIPQ9P287 314 aaKnown RBP eCLIP7.36□□□□□ -1.23
CHD6-209ENST00000482596 BTBD3Q9Y2F9 522 aa7.36□□□□□ -1.23
CHD6-209ENST00000482596 FBN1P35555 2871 aaKnown RBP7.35□□□□□ -1.23
CHD6-209ENST00000482596 TDRD15B5MCY1 1934 aaKnown RBP7.35□□□□□ -1.23
CHD6-209ENST00000482596 ANO9A1A5B4 782 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 ANTXRLA6NF34 631 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 MOSPD3O75425 235 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 SYPP08247 313 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 SNHG28P0DPA3 235 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 KCNA2P16389 499 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 HOXB4P17483 251 aaPredicted RBP7.35□□□□□ -1.23
CHD6-209ENST00000482596 EIF4BP23588 611 aaKnown RBP7.35□□□□□ -1.23
CHD6-209ENST00000482596 U2AF2P26368 475 aaKnown RBP eCLIP7.35□□□□□ -1.234e-6■■□□□ 13.7
CHD6-209ENST00000482596 DCTP40126 519 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 P2RY2P41231 377 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 UCNP55089 124 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 FCHO2Q0JRZ9 810 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 TARDBPQ13148 414 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD6-209ENST00000482596 UBE3CQ15386 1083 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 USP41Q3LFD5 358 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 TBC1D25Q3MII6 688 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 FUT10Q6P4F1 479 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 AACSQ86V21 672 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 COLGALT2Q8IYK4 626 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 CCDC116Q8IYX3 515 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 ADGRF4Q8IZF3 695 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 TSTD1Q8NFU3 115 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 OLIG1Q8TAK6 271 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 EZH1Q92800 747 aaPredicted RBP7.35□□□□□ -1.23
CHD6-209ENST00000482596 HIC2Q96JB3 615 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 ZFP42Q96MM3 310 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 CORO1BQ9BR76 489 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 TRPV4Q9HBA0 871 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 AVENQ9NQS1 362 aaPredicted RBP7.35□□□□□ -1.23
CHD6-209ENST00000482596 DACT1Q9NYF0 836 aa7.35□□□□□ -1.23
CHD6-209ENST00000482596 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD6-209ENST00000482596 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 BCAR3O75815 825 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 GNAI3P08754 354 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 RNF224P0DH78 156 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 TOP1P11387 765 aaKnown RBP7.34□□□□□ -1.23
CHD6-209ENST00000482596 JUPP14923 745 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 PTPN2P17706 415 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 HOXD12P35452 270 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 ACTN2P35609 894 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 CLCN3P51790 818 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 GRSF1Q12849 480 aaKnown RBP eCLIP7.34□□□□□ -1.236e-6■■□□□ 11.5
CHD6-209ENST00000482596 USP49Q70CQ1 688 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 TMPRSS12Q86WS5 348 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 TTC30AQ86WT1 665 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 ARID3BQ8IVW6 561 aaPredicted RBP7.34□□□□□ -1.23
CHD6-209ENST00000482596 ZNF248Q8NDW4 579 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 URGCPQ8TCY9 931 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 RHBDD1Q8TEB9 315 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 RSPH1Q8WYR4 309 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 RABGGTAQ92696 567 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 CNOT6LQ96LI5 555 aaKnown RBP7.34□□□□□ -1.23
CHD6-209ENST00000482596 NRSN2Q9GZP1 204 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 EPN3Q9H201 632 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 PAG1Q9NWQ8 432 aa7.34□□□□□ -1.23
CHD6-209ENST00000482596 ANP32CO43423 234 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 PPP1R11O60927 126 aaPredicted RBP7.33□□□□□ -1.24
CHD6-209ENST00000482596 C22orf31O95567 290 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 HNRNPLP14866 589 aaKnown RBP eCLIP7.33□□□□□ -1.242e-6■■□□□ 11.4
CHD6-209ENST00000482596 GRIK2Q13002 908 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 PPP1R26Q5T8A7 1209 aaPredicted RBP7.33□□□□□ -1.24
CHD6-209ENST00000482596 TWF2Q6IBS0 349 aaKnown RBP7.33□□□□□ -1.24
CHD6-209ENST00000482596 METTL13Q8N6R0 699 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 CDC6Q99741 560 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 GZF1Q9H116 711 aaPredicted RBP7.33□□□□□ -1.24
CHD6-209ENST00000482596 BCL11AQ9H165 835 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 AZI2Q9H6S1 392 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 VAT1LQ9HCJ6 419 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 FAM105AQ9NUU6 356 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 PGPEP1Q9NXJ5 209 aa7.33□□□□□ -1.24
CHD6-209ENST00000482596 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.33□□□□□ -1.24
CHD6-209ENST00000482596 SDK2Q58EX2 2172 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 OTOL1A6NHN0 477 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms