RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 CYP1A1P04798 512 aaPredicted RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 MCF2P10911 925 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 GNAT1P11488 350 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 CENPCQ03188 943 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 PAK2Q13177 524 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 KCNA10Q16322 511 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 KIAA0319LQ8IZA0 1049 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 ANKRD36BP1Q96IX9 119 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 FDXACB1Q9BRP7 624 aaPredicted RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 APOBEC3GQ9HC16 384 aaKnown RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 GDF3Q9NR23 364 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 PCDHB4Q9Y5E5 795 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 TRIP12Q14669 1992 aaPredicted RBP16.83■□□□□ 0.29
RXRA-202ENST00000481739 TTLL13PA6NNM8 815 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 ASGR1P07306 291 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 TMEM191BP0C7N4 346 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 NSFP46459 744 aaKnown RBP16.83■□□□□ 0.28
RXRA-202ENST00000481739 ZNF200P98182 395 aaPredicted RBP16.83■□□□□ 0.28
RXRA-202ENST00000481739 TMEM62Q0P6H9 643 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 TRPC3Q13507 836 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 NBPF20Q3BBV1 942 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 FAM47CQ5HY64 1035 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 RNF180Q86T96 592 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 ZNF410Q86VK4 478 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 KRT12Q99456 494 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 NUP85Q9BW27 656 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 PLVAPQ9BX97 442 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 NIF3L1Q9GZT8 377 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 RPF1Q9H9Y2 349 aaKnown RBP16.83■□□□□ 0.28
RXRA-202ENST00000481739 IFT122Q9HBG6 1241 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 MED4Q9NPJ6 270 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 WBP1LQ9NX94 342 aa16.83■□□□□ 0.28
RXRA-202ENST00000481739 HTTP42858 3142 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 KRIT1O00522 736 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 TREHO43280 583 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 HEXIM1O94992 359 aaKnown RBP16.82■□□□□ 0.28
RXRA-202ENST00000481739 GNA15P30679 374 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 TNFSF9P41273 254 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 ZNF132P52740 706 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 NKX3-2P78367 333 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 HIC1Q14526 733 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 HSP90B2PQ58FF3 399 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 RUFY4Q6ZNE9 571 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 MAATS1Q7Z4T9 603 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 UBR7Q8N806 425 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 PCSK9Q8NBP7 692 aaKnown RBP16.82■□□□□ 0.28
RXRA-202ENST00000481739 RBBP8NLQ8NC74 664 aaPredicted RBP16.82■□□□□ 0.28
RXRA-202ENST00000481739 CCDC26Q8TAB7 109 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 SH3TC2Q8TF17 1288 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 ZSWIM1Q9BR11 485 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 MTMR12Q9C0I1 747 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 CDT1Q9H211 546 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 ACP6Q9NPH0 428 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 CNOT8Q9UFF9 292 aaKnown RBP16.82■□□□□ 0.28
RXRA-202ENST00000481739 LCMT1Q9UIC8 334 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 GINS2Q9Y248 185 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 NUB1Q9Y5A7 615 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 SMIM35A0A1B0GVV1 85 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 MBLAC1A4D2B0 266 aaPredicted RBP16.82■□□□□ 0.28
RXRA-202ENST00000481739 CTNNA2P26232 953 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 TNNT3P45378 269 aaPredicted RBP16.82■□□□□ 0.28
RXRA-202ENST00000481739 CUL1Q13616 776 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 PCBP1Q15365 356 aaKnown RBP eCLIP16.82■□□□□ 0.284e-7■■■□□ 14.9
RXRA-202ENST00000481739 LIN9Q5TKA1 542 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 SPOPLQ6IQ16 392 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 TMEM270Q6UE05 265 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 APBB1IPQ7Z5R6 666 aaPredicted RBP16.82■□□□□ 0.28
RXRA-202ENST00000481739 MCOLN2Q8IZK6 566 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 KLHDC9Q8NEP7 349 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 CAVIN3Q969G5 261 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 RNPC3Q96LT9 517 aaKnown RBP16.82■□□□□ 0.28
RXRA-202ENST00000481739 FAM124BQ9H5Z6 455 aaPredicted RBP16.82■□□□□ 0.28
RXRA-202ENST00000481739 ASB7Q9H672 318 aa16.82■□□□□ 0.28
RXRA-202ENST00000481739 CSDE1O75534 798 aaKnown RBP16.81■□□□□ 0.28
RXRA-202ENST00000481739 LSM8O95777 96 aaKnown RBP16.81■□□□□ 0.28
RXRA-202ENST00000481739 SLC1A1P43005 524 aa16.81■□□□□ 0.28
RXRA-202ENST00000481739 AARSP49588 968 aaKnown RBP eCLIP16.81■□□□□ 0.285e-6■■■■■ 52
RXRA-202ENST00000481739 KIZQ2M2Z5 673 aa16.81■□□□□ 0.28
RXRA-202ENST00000481739 DNAJB3Q8WWF6 145 aa16.81■□□□□ 0.28
RXRA-202ENST00000481739 CD101Q93033 1021 aa16.81■□□□□ 0.28
RXRA-202ENST00000481739 MINDY3Q9H8M7 445 aa16.81■□□□□ 0.28
RXRA-202ENST00000481739 CEP350Q5VT06 3117 aa16.81■□□□□ 0.28
RXRA-202ENST00000481739 ZMYND10O75800 440 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 FGGP02679 453 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 COMTP21964 271 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 CST5P28325 142 aaPredicted RBP16.8■□□□□ 0.28
RXRA-202ENST00000481739 CTNNA1P35221 906 aaKnown RBP16.8■□□□□ 0.28
RXRA-202ENST00000481739 C1QBPQ07021 282 aaKnown RBP16.8■□□□□ 0.28
RXRA-202ENST00000481739 AMHR2Q16671 573 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 SEZ6Q53EL9 994 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 NT5DC4Q86YG4 428 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 PHF13Q86YI8 300 aaPredicted RBP16.8■□□□□ 0.28
RXRA-202ENST00000481739 THNSL1Q8IYQ7 743 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 WHAMMQ8TF30 809 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 MRPL47Q9HD33 250 aaKnown RBP16.8■□□□□ 0.28
RXRA-202ENST00000481739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.8■□□□□ 0.281e-6■■■■□ 22.7
RXRA-202ENST00000481739 SCINQ9Y6U3 715 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 SCN10AQ9Y5Y9 1956 aa16.8■□□□□ 0.28
RXRA-202ENST00000481739 B4GALT5O43286 388 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms