RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 RXRAP19793 462 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 GARTP22102 1010 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 TMOD1P28289 359 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 SREBF1P36956 1147 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 DEFB103AP81534 67 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 MRPS6P82932 125 aaKnown RBP7.1□□□□□ -1.27
HOXB3-209ENST00000478644 UBE3AQ05086 875 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 BMS1Q14692 1282 aaKnown RBP7.1□□□□□ -1.27
HOXB3-209ENST00000478644 PFKFB3Q16875 520 aaPredicted RBP7.1□□□□□ -1.27
HOXB3-209ENST00000478644 EPC2Q52LR7 807 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 GALNT17Q6IS24 598 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 CPLX2Q6PUV4 134 aaKnown RBP7.1□□□□□ -1.27
HOXB3-209ENST00000478644 ERMP1Q7Z2K6 904 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 TMEM192Q8IY95 271 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 CYB5D2Q8WUJ1 264 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 UBE2FQ969M7 185 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 PABPC5Q96DU9 382 aaKnown RBP7.1□□□□□ -1.27
HOXB3-209ENST00000478644 ZNF274Q96GC6 653 aaPredicted RBP7.1□□□□□ -1.27
HOXB3-209ENST00000478644 CCDC120Q96HB5 630 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 FAM167AQ96KS9 214 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 ZMYND12Q9H0C1 365 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 DUSP15Q9H1R2 295 aaPredicted RBP7.1□□□□□ -1.27
HOXB3-209ENST00000478644 KCNH6Q9H252 994 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 PIF1Q9H611 641 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 NSUN3Q9H649 340 aaKnown RBP7.1□□□□□ -1.27
HOXB3-209ENST00000478644 ZSWIM4Q9H7M6 989 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 C1orf112Q9NSG2 853 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 NRBP2Q9NSY0 501 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 PDRG1Q9NUG6 133 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 FAM53CQ9NYF3 392 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 TRANK1O15050 2925 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 CHD9Q3L8U1 2897 aa7.1□□□□□ -1.27
HOXB3-209ENST00000478644 NID2Q14112 1375 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 IGKV6D-21A0A0A0MT36 114 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 ZNF503-AS2A6NEH8 195 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 GOLGA8AA7E2F4 631 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 GOLGA8BA8MQT2 603 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 ENPP3O14638 875 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 DKC1O60832 514 aaKnown RBP eCLIP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 ATP9AO75110 1047 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 BPNT1O95861 308 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 ESR1P03372 595 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 SRGAP2BP0DMP2 458 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 SCG2P13521 617 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 INSRRP14616 1297 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 XBP1P17861 261 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 PLCG1P19174 1290 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 PDIA3P30101 505 aaKnown RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 SFNP31947 248 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 BMPR1AP36894 532 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 METAP2P50579 478 aaKnown RBP eCLIP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 YARSP54577 528 aaKnown RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 ACTR2P61160 394 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 ZNF200P98182 395 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 APOBRQ0VD83 1088 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 PAK2Q13177 524 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 FZD5Q13467 585 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 GPM6BQ13491 265 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 TOB2Q14106 344 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 PKN1Q16512 942 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 RAB11FIP4Q86YS3 637 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 CMTR2Q8IYT2 770 aaKnown RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 RDM1Q8NG50 284 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 PIBF1Q8WXW3 757 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 ZNF689Q96CS4 500 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 NAP1L4Q99733 375 aaKnown RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 JPH2Q9BR39 696 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 RNF26Q9BY78 433 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 ANO3Q9BYT9 981 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 CELF4Q9BZC1 486 aaKnown RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 GPR62Q9BZJ7 368 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 UBE2ZQ9H832 354 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 VTI1BQ9UEU0 232 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 PCDHA10Q9Y5I2 948 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 TRPV2Q9Y5S1 764 aa7.09□□□□□ -1.27
HOXB3-209ENST00000478644 ARID1BQ8NFD5 2236 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 TRIP12Q14669 1992 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-209ENST00000478644 GBF1Q92538 1859 aa7.09□□□□□ -1.28
HOXB3-209ENST00000478644 CDH23Q9H251 3354 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 IGSF9BQ9UPX0 1349 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 UPK3BL1B0FP48 263 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 UPK3BL2E5RIL1 263 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 PI4K2BG5E9Z4 385 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 IPO5O00410 1097 aaKnown RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 DGKIO75912 1065 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 CDKL5O76039 1030 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 CHRNA1P02708 482 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 IFNAR1P17181 557 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 GBP2P32456 591 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 CIITAP33076 1130 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 CRYBB1P53674 252 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 MGAT3Q09327 533 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 MESP2Q0VG99 397 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 MPP2Q14168 576 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 BTG3Q14201 252 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-209ENST00000478644 ANKRD1Q15327 319 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 NTRK3Q16288 839 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 GAB4Q2WGN9 574 aa7.08□□□□□ -1.28
HOXB3-209ENST00000478644 FBXO47Q5MNV8 452 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms