RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 KRT19P08727 400 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 SLC9A1P19634 815 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 AP3M2P53677 418 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 APBA1Q02410 837 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 KCNMA1Q12791 1236 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 CLUL1Q15846 466 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 EXOC3L4Q17RC7 722 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 ZACNQ401N2 412 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 EPC2Q52LR7 807 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 XKR4Q5GH76 650 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 CLLU1OSQ5K130 101 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 SCARA3Q6AZY7 606 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 GLB1LQ6UWU2 654 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 C15orf39Q6ZRI6 1047 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 TRAPPC11Q7Z392 1133 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 VSTM4Q8IW00 320 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 SPC24Q8NBT2 197 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 BEST2Q8NFU1 509 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
PDCD11-204ENST00000478543 SEMA4DQ92854 862 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 ERGIC2Q96RQ1 377 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 INTS2Q9H0H0 1204 aaKnown RBP12.6□□□□□ -0.39
PDCD11-204ENST00000478543 ELAC1Q9H777 363 aaKnown RBP12.6□□□□□ -0.39
PDCD11-204ENST00000478543 UBN1Q9NPG3 1134 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 PRKAG3Q9UGI9 489 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 PLAGL2Q9UPG8 496 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 DERAQ9Y315 318 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 C2CD2Q9Y426 696 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 SPTBN4Q9H254 2564 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 ABHD14A-ACY1A0A1B0GW23 586 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 A0A1W2PQC6 194 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 P4HA2O15460 535 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 LRRN2O75325 713 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 AMHP03971 560 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 ITGB3P05106 788 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 KCNE1P15382 129 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 CDC25BP30305 580 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 PBX1P40424 430 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 HTRA4P83105 476 aaPredicted RBP12.59□□□□□ -0.39
PDCD11-204ENST00000478543 CETN1Q12798 172 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 LRMPQ12912 555 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 SMAD2Q15796 467 aaKnown RBP12.59□□□□□ -0.39
PDCD11-204ENST00000478543 PUS10Q3MIT2 529 aaKnown RBP12.59□□□□□ -0.39
PDCD11-204ENST00000478543 FAM43BQ6ZT52 329 aaPredicted RBP12.59□□□□□ -0.39
PDCD11-204ENST00000478543 NT5DC4Q86YG4 428 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 RNF135Q8IUD6 432 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 NPAS4Q8IUM7 802 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 C1orf127Q8N9H9 656 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 EHBP1Q8NDI1 1231 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 FBXL13Q8NEE6 735 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 URGCPQ8TCY9 931 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 PPP1R10Q96QC0 940 aaKnown RBP12.59□□□□□ -0.39
PDCD11-204ENST00000478543 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 GOLGA2P5Q9HBQ8 144 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 FAM207AQ9NSI2 230 aaPredicted RBP12.59□□□□□ -0.39
PDCD11-204ENST00000478543 DPP3Q9NY33 737 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 UBQLN1Q9UMX0 589 aaKnown RBP12.59□□□□□ -0.39
PDCD11-204ENST00000478543 SIK3Q9Y2K2 1263 aa12.59□□□□□ -0.39
PDCD11-204ENST00000478543 PDCD11Q14690 1871 aaKnown RBP12.59□□□□□ -0.39
PDCD11-204ENST00000478543 MYO7AQ13402 2215 aa12.58□□□□□ -0.39
PDCD11-204ENST00000478543 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 GTPBP10A4D1E9 387 aaKnown RBP12.58□□□□□ -0.4
PDCD11-204ENST00000478543 PPEF2O14830 753 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 XPOTO43592 962 aaKnown RBP12.58□□□□□ -0.4
PDCD11-204ENST00000478543 EFCAB14O75071 495 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 THP07101 528 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 PON1P27169 355 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 POLR2BP30876 1174 aaKnown RBP12.58□□□□□ -0.4
PDCD11-204ENST00000478543 GTF2F1P35269 517 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDCD11-204ENST00000478543 MYL6P60660 151 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 SOX4Q06945 474 aaPredicted RBP12.58□□□□□ -0.4
PDCD11-204ENST00000478543 TRPC3Q13507 836 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 NCOA4Q13772 614 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 CTC1Q2NKJ3 1217 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 PAN2Q504Q3 1202 aaKnown RBP12.58□□□□□ -0.4
PDCD11-204ENST00000478543 NOMO2Q5JPE7 1267 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 EP400NLQ6ZTU2 488 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 ABI1Q8IZP0 508 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 GSTCDQ8NEC7 633 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 CLDND1Q9NY35 253 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 CACNG4Q9UBN1 327 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 SIX4Q9UIU6 781 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 ITGA11Q9UKX5 1188 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 AGAP1Q9UPQ3 857 aa12.58□□□□□ -0.4
PDCD11-204ENST00000478543 ZDBF2Q9HCK1 2354 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 TBKBP1A7MCY6 615 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 H3BNC9 293 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 EPHB6O15197 1021 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 PMM2O15305 246 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 HOXA2O43364 376 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 MBTPS2O43462 519 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 GFRA3O60609 400 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 TBX10O75333 385 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 CST3P01034 146 aaPredicted RBP12.57□□□□□ -0.4
PDCD11-204ENST00000478543 VCPP55072 806 aaKnown RBP12.57□□□□□ -0.4
PDCD11-204ENST00000478543 GRIK3Q13003 919 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 NAB2Q15742 525 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms