RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 BRPF3Q9ULD4 1205 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 MAFFQ9ULX9 164 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 RAI2Q9Y5P3 530 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 APC2O95996 2303 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 A0A087WV48 116 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 ZBTB39O15060 712 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 TBX3O15119 743 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 RECQL4O94761 1208 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 EGFP01133 1207 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 PRKCBP05771 671 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 P4HBP07237 508 aaKnown RBP8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 ENGP17813 658 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 BCKDHBP21953 392 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 CHMLP26374 656 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 CDC27P30260 824 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 WEE1P30291 646 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 YWHABP31946 246 aaKnown RBP8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 ARL2P36404 184 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 PSEN1P49768 467 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 ARPP19P56211 112 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 NUCB1Q02818 461 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 CAPSQ13938 189 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 TFDP1Q14186 410 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 PTPAQ15257 358 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 USP39Q53GS9 565 aaKnown RBP8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 SLC23A3Q6PIS1 610 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 SYNE3Q6ZMZ3 975 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 ZNF605Q86T29 641 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 TMC8Q8IU68 726 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 C4orf19Q8IY42 314 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 DAGLBQ8NCG7 672 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 BPIFB1Q8TDL5 484 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 ASAP3Q8TDY4 903 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 RUFY2Q8WXA3 655 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 PPP1R10Q96QC0 940 aaKnown RBP8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 MTRQ99707 1265 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 DKK4Q9UBT3 224 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 AFF4Q9UHB7 1163 aaKnown RBP8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 FBXL5Q9UKA1 691 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 PCDHB8Q9UN66 801 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 PCDHB13Q9Y5F0 798 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 RBM8AQ9Y5S9 174 aaKnown RBP8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 CFAP46Q8IYW2 2715 aa8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 MYH9P35579 1960 aaKnown RBP8.09□□□□□ -1.11
SPTLC1-205ENST00000477888 ZNF462Q96JM2 2506 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 TICRRQ7Z2Z1 1910 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 TTLL13PA6NNM8 815 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 DPYSL4O14531 572 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 TNFRSF10BO14763 440 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 ATXN7O15265 892 aaPredicted RBP8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 SGSM2O43147 1006 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 DKC1O60832 514 aaKnown RBP eCLIP8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 PPP1R37O75864 691 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 TDP2O95551 362 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 CD59P13987 128 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 GLRA2P23416 452 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 DHPSP49366 369 aaPredicted RBP8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 GALK1P51570 392 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 DGKEP52429 567 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 PPP2R5CQ13362 524 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 RUNX3Q13761 415 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 HNRNPDQ14103 355 aaKnown RBP8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 DMC1Q14565 340 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 FBXO43Q4G163 708 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 GAREM2Q75VX8 874 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 OTUD6AQ7L8S5 288 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 RASSF3Q86WH2 238 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 SYT12Q8IV01 421 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 ZNF843Q8N446 348 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 BEST2Q8NFU1 509 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 CCDC12Q8WUD4 166 aaPredicted RBP8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 EZH1Q92800 747 aaPredicted RBP8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 NUSAP1Q9BXS6 441 aaKnown RBP8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 DNAJC25Q9H1X3 360 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 HPS4Q9NQG7 708 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 GKN1Q9NS71 199 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 VAV3Q9UKW4 847 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 TPCN1Q9ULQ1 816 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 ASCC3Q8N3C0 2202 aaKnown RBP8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 HECTD1Q9ULT8 2610 aa8.08□□□□□ -1.12
SPTLC1-205ENST00000477888 SPAG17Q6Q759 2223 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 WDR81Q562E7 1941 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 ACACAQ13085 2346 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 H7C4K7 107 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 SYN3O14994 580 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 ZBTB43O43298 467 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 VNN2O95498 520 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 PRAMEF12O95522 483 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 GSPT1P15170 499 aaKnown RBP8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 DRD1P21728 446 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 ADD1P35611 737 aaKnown RBP8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 PTGER3P43115 390 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 SOX4Q06945 474 aaPredicted RBP8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 TRIP6Q15654 476 aaKnown RBP8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 XKR9Q5GH70 373 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 RNF19BQ6ZMZ0 732 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 NOSTRINQ8IVI9 506 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 PNPLA1Q8N8W4 532 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 LSM14AQ8ND56 463 aaKnown RBP8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 RPLP0P6Q8NHW5 317 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms