RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CLDN10P78369 228 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 ZP2Q05996 745 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 SMARCB1Q12824 385 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 EDRF1Q3B7T1 1238 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 SV2CQ496J9 727 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 VARS2Q5ST30 1063 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 ZNF280DQ6N043 979 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 HASPINQ8TF76 798 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 RABGGTAQ92696 567 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 SAAL1Q96ER3 474 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 IKZF4Q9H2S9 585 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 INTS13Q9NVM9 706 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 HSFX1Q9UBD0 423 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 CACNG4Q9UBN1 327 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 TNFRSF10AO00220 468 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 DLL1O00548 723 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 ODC1P11926 461 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 IL9P15248 144 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 BRCC3P46736 316 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 RBP5P82980 135 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 YWHAHQ04917 246 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 CYP24A1Q07973 514 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 LIN9Q5TKA1 542 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 LLGL2Q6P1M3 1020 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 PRSS55Q6UWB4 352 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 CCDC149Q6ZUS6 474 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 DPH6Q7L8W6 267 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 CBWD2Q8IUF1 395 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 EFCAB13Q8IY85 973 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 KREMEN2Q8NCW0 462 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 CXorf38Q8TB03 319 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 FAM212AQ96EL1 285 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 ANKRD36BP1Q96IX9 119 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 MAN1C1Q9NR34 630 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 GDAP2Q9NXN4 497 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 NR2E1Q9Y466 385 aa13.35□□□□□ -0.27
CLCNKA-205ENST00000477360 TRIP11Q15643 1979 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 LOC730098B7Z3J9 87 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 IKBKBO14920 756 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 EXOC3O60645 756 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 ZMYND10O75800 440 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 STAU1O95793 577 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 MBD3O95983 291 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 TNNC2P02585 160 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 TMEM191BP0C7N4 346 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 ATF2P15336 505 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 OR1D2P34982 312 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 RBM10P98175 930 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 SPAG1Q07617 926 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 ZNF658Q5TYW1 1059 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 NELFCDQ8IXH7 590 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 TCEAL8Q8IYN2 117 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 GJD3Q8N144 294 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 TMEM86AQ8N2M4 240 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 C1orf127Q8N9H9 656 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 SMARCE1Q969G3 411 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 BORCS6Q96GS4 357 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 B3GALT6Q96L58 329 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 SENP8Q96LD8 212 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 PRKD2Q9BZL6 878 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 PCIF1Q9H4Z3 704 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 PDE11AQ9HCR9 933 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 AFF4Q9UHB7 1163 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 FBXL5Q9UKA1 691 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 CDY1Q9Y6F8 540 aa13.34□□□□□ -0.27
CLCNKA-205ENST00000477360 VCANP13611 3396 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 KPNA7A9QM74 516 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 NR3C1P04150 777 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 IGFBP6P24592 240 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 MYO1EQ12965 1108 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 CTXN3Q4LDR2 81 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 ZCWPW2Q504Y3 356 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 OVOS1Q6IE37 1185 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 DSTYKQ6XUX3 929 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 LIMS2Q7Z4I7 341 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 METTL23Q86XA0 190 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 PALB2Q86YC2 1186 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 C2orf15Q8WU43 125 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 CGRRF1Q99675 332 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 MKNK1Q9BUB5 465 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 VRTNQ9H8Y1 702 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 FRMD4BQ9Y2L6 1034 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 R3HCC1Q9Y3T6 440 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 PCDHA5Q9Y5H7 936 aa13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 ZFP37Q9Y6Q3 630 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-205ENST00000477360 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 I3L4J1 428 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 CLIC2O15247 247 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 SPTLC1O15269 473 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 XYLBO75191 536 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 ATICP31939 592 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 CYP2J2P51589 502 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms