RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	PLA2G6	O60733	806 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SLC25A27	O95847	323 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	NDUFB10	O96000	172 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LRG1	P02750	347 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	HSP90AA1	P07900	732 aa	Known RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	HSPA1A	P0DMV8	641 aa	Known RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	HSPA1B	P0DMV9	641 aa	Known RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	XBP1	P17861	261 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MAPK4	P31152	587 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	GRIA2	P42262	883 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	KCNJ6	P48051	423 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	METAP2	P50579	478 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	RCAN1	P53805	252 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	PRMT2	P55345	433 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	HERVK_113	P62684	666 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LSAMP	Q13449	338 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FAM110C	Q1W6H9	321 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TKFC	Q3LXA3	575 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SLC35F1	Q5T1Q4	408 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	STEAP3	Q658P3	488 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CRIP3	Q6Q6R5	217 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TEPP	Q6URK8	271 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	KCTD1	Q719H9	257 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LIMS2	Q7Z4I7	341 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MB21D2	Q8IYB1	491 aa	Predicted RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ENAH	Q8N8S7	591 aa	Predicted RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	JMY	Q8N9B5	988 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CCDC12	Q8WUD4	166 aa	Predicted RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	WASF1	Q92558	559 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CUL5	Q93034	780 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	RRP36	Q96EU6	259 aa	Known RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ZSWIM3	Q96MP5	696 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MAP3K14	Q99558	947 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SLK	Q9H2G2	1235 aa	Predicted RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CAPN10	Q9HC96	672 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	VAT1L	Q9HCJ6	419 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	IL17RB	Q9NRM6	502 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	DTL	Q9NZJ0	730 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	COA3	Q9Y2R0	106 aa	Predicted RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	PCDHB4	Q9Y5E5	795 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	NPFFR2	Q9Y5X5	522 aa		5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FRMPD2	Q68DX3	1309 aa	Predicted RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	DDX60L	Q5H9U9	1706 aa	Known RBP	5.17	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ATAD5	Q96QE3	1844 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	C9orf118	A6NHY6	69 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SMIM22	K7EJ46	135 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TNPO2	O14787	897 aa	Known RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	STRN	O43815	780 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SSB	P05455	408 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	PDHB	P11177	359 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SMARCA1	P28370	1054 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	STAT3	P40763	770 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	RBM25	P49756	843 aa	Known RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	OAZ1	P54368	228 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MLLT6	P55198	1093 aa	Predicted RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	EXOSC10	Q01780	885 aa	Known RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ZNF543	Q08ER8	600 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CRHR2	Q13324	411 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TRIM29	Q14134	588 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	KCTD2	Q14681	263 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	GRM4	Q14833	912 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SEC23A	Q15436	765 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ADCK5	Q3MIX3	580 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TREML2	Q5T2D2	321 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SYDE2	Q5VT97	1194 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	BORA	Q6PGQ7	559 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	STOX1	Q6ZVD7	989 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FAM124A	Q86V42	546 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SGMS1	Q86VZ5	419 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MICU3	Q86XE3	530 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MCF2L2	Q86YR7	1114 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CPXCR1	Q8N123	301 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ANKRD13C	Q8N6S4	541 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	DNAJC5G	Q8N7S2	189 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FANCB	Q8NB91	859 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	IGDCC4	Q8TDY8	1250 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ZNF274	Q96GC6	653 aa	Predicted RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TOE1	Q96GM8	510 aa	Known RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LCOR	Q96JN0	433 aa	Predicted RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	P2RX7	Q99572	595 aa	Known RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	PTPN18	Q99952	460 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	YIPF4	Q9BSR8	244 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TEX13B	Q9BXU2	312 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LRRC2	Q9BYS8	371 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	UPF3B	Q9BZI7	483 aa	Known RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MROH8	Q9H579	483 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LY9	Q9HBG7	655 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CLDND1	Q9NY35	253 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CPA4	Q9UI42	421 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MRPL11	Q9Y3B7	192 aa	Known RBP	5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LAMA4	Q16363	1823 aa		5.16	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	OTOF	Q9HC10	1997 aa		5.15	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	hCG_1984214	I3L0E3	225 aa		5.15	□□□□□ -1.59
NSMCE4A-208	ENST00000477289	VWA5A	O00534	786 aa		5.15	□□□□□ -1.59
NSMCE4A-208	ENST00000477289	ZBTB5	O15062	677 aa		5.15	□□□□□ -1.59
NSMCE4A-208	ENST00000477289	GJB6	O95452	261 aa		5.15	□□□□□ -1.59
NSMCE4A-208	ENST00000477289	GOLGA8H	P0CJ92	632 aa		5.15	□□□□□ -1.59
NSMCE4A-208	ENST00000477289	FCER1A	P12319	257 aa		5.15	□□□□□ -1.59
NSMCE4A-208	ENST00000477289	ALAS1	P13196	640 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms