RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 TCF3P15923 654 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 TNFRSF8P28908 595 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 BLVRAP53004 296 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 ADKP55263 362 aaKnown RBP8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 TAF1CQ15572 869 aaPredicted RBP8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 DENND2CQ68D51 928 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 RAD9BQ6WBX8 426 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 ST13P4Q8IZP2 240 aaPredicted RBP8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 C12orf50Q8NA57 414 aaPredicted RBP8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 MDM1Q8TC05 714 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CAGE1Q8TC20 777 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 PYROXD1Q8WU10 500 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 UTP4Q969X6 686 aaKnown RBP8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 TMA16Q96EY4 203 aaKnown RBP8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 OTUD5Q96G74 571 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 PBKQ96KB5 322 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CCDC43Q96MW1 224 aaKnown RBP8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SAMD11Q96NU1 681 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 ALG1Q9BT22 464 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 DPH5Q9H2P9 285 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SIAEQ9HAT2 523 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 USP29Q9HBJ7 922 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 PALMDQ9NP74 551 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 KCNN3Q9UGI6 736 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 PFDN2Q9UHV9 154 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SPEF1Q9Y4P9 236 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 TIAM2Q8IVF5 1701 aa8.76□□□□□ -1.01
CNTNAP3B-205ENST00000476961 USP17L3A6NCW0 530 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 USP17L4A6NCW7 530 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 MINDY4BA8MYZ0 360 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 B4E1Z4 1266 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 USP17L21D6R901 530 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 EXTL3O43909 919 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 KLHL2O95198 593 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SERPINC1P01008 464 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 HOXB1P14653 301 aaPredicted RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 VPS41P49754 854 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SCNN1DP51172 638 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 IST1P53990 364 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 FKBP1AP62942 108 aaKnown RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CHRNEQ04844 493 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 LPIN1Q14693 890 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SGO2Q562F6 1265 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 WDR44Q5JSH3 913 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SHEQ5VZ18 495 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CYB5R4Q7L1T6 521 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 USP17L1Q7RTZ2 530 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 RALYLQ86SE5 291 aaKnown RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 MREGQ8N565 214 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 NLGN2Q8NFZ4 835 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 PMEPA1Q969W9 287 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 BTBD6Q96KE9 485 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 ZNF317Q96PQ6 595 aaPredicted RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 KIAA1683Q9H0B3 1180 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SH2B1Q9NRF2 756 aaPredicted RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 GGA3Q9NZ52 723 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 ERVK-11Q9UQG0 969 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 BRCA1P38398 1863 aaKnown RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 ZNF646O15015 1829 aaPredicted RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CENPBD1B2RD01 187 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 VILLO15195 856 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 TLR2O60603 784 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 RPN1P04843 607 aaKnown RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CALM1P0DP23 149 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CALM2P0DP24 149 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CALM3P0DP25 149 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CYP2D6P10635 497 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 PARP6Q2NL67 630 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 METTL2BQ6P1Q9 378 aaKnown RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 MFSD6Q6ZSS7 791 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SFR1Q86XK3 245 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 FBXL16Q8N461 479 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 ENGASEQ8NFI3 743 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 TGFBRAP1Q8WUH2 860 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 RSAD2Q8WXG1 361 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 RNF41Q9H4P4 317 aaPredicted RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 ATP13A3Q9H7F0 1226 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 WDR6Q9NNW5 1121 aaKnown RBP8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 INTS13Q9NVM9 706 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 IFT52Q9Y366 437 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 MYH2Q9UKX2 1941 aa8.75□□□□□ -1.01
CNTNAP3B-205ENST00000476961 PASKQ96RG2 1323 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 IQANK1A0A1B0GTG1 560 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 B8ZZF3 427 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 NFKBIEO00221 500 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 FGF18O76093 207 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 OR6B1O95007 311 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 USP17L8P0C7I0 530 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 CCNB1P14635 433 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 KRT6CP48668 564 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 MAP3K7CLP57077 242 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 SPECC1LQ69YQ0 1117 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 FAM83AQ86UY5 434 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 MMGT1Q8N4V1 131 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 ARRDC4Q8NCT1 418 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 IPCEF1Q8WWN9 437 aaPredicted RBP8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 DYDC2Q96IM9 177 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 VPS35Q96QK1 796 aa8.74□□□□□ -1.01
CNTNAP3B-205ENST00000476961 DMGDHQ9UI17 866 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms