RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 ZNF528Q3MIS6 628 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 MTSS1LQ765P7 747 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 SFR1Q86XK3 245 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 NPAS3Q8IXF0 933 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 SLC7A14Q8TBB6 771 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 PRIMPOLQ96LW4 560 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 CNTNAP3BQ96NU0 1288 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 GSDMAQ96QA5 445 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 HINFPQ9BQA5 517 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 KXD1Q9BQD3 176 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 CNTNAP3Q9BZ76 1288 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 OSBPL6Q9BZF3 934 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 ZHX3Q9H4I2 956 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 CBX8Q9HC52 389 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 SLC39A2Q9NP94 309 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 EXOC1Q9NV70 894 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 PANK4Q9NVE7 773 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 PRMT7Q9NVM4 692 aaPredicted RBP11.48□□□□□ -0.57
PGK1-203ENST00000476531 ANO10Q9NW15 660 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 SPATA6Q9NWH7 488 aaPredicted RBP11.48□□□□□ -0.57
PGK1-203ENST00000476531 HCFC1R1Q9NWW0 138 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 SNTG2Q9NY99 539 aa11.48□□□□□ -0.57
PGK1-203ENST00000476531 DNMT3BQ9UBC3 853 aaKnown RBP11.48□□□□□ -0.57
PGK1-203ENST00000476531 LRRIQ4A6NIV6 560 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 FAM170BA6NMN3 283 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 LAMTOR5O43504 91 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 XYLBO75191 536 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 RECQL4O94761 1208 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 EDN1P05305 212 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 MYL1P05976 194 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 THP07101 528 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 XRCC6P12956 609 aaKnown RBP eCLIP11.47□□□□□ -0.57
PGK1-203ENST00000476531 FGFR3P22607 806 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 GUCY2CP25092 1073 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 CASP5P51878 434 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 GSE1Q14687 1217 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 UBXN2BQ14CS0 331 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 RSPO4Q2I0M5 234 aaPredicted RBP11.47□□□□□ -0.57
PGK1-203ENST00000476531 POTEHQ6S545 545 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 CD300LGQ6UXG3 332 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 RSPO2Q6UXX9 243 aaPredicted RBP11.47□□□□□ -0.57
PGK1-203ENST00000476531 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.47□□□□□ -0.57
PGK1-203ENST00000476531 LUZP1Q86V48 1076 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 KCTD17Q8N5Z5 321 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 CCDC34Q96HJ3 373 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 CCDC43Q96MW1 224 aaKnown RBP11.47□□□□□ -0.57
PGK1-203ENST00000476531 BCO2Q9BYV7 579 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 IKZF4Q9H2S9 585 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 LTB4R2Q9NPC1 389 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 POLIQ9UNA4 740 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 CTNND2Q9UQB3 1225 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 USP20Q9Y2K6 914 aa11.47□□□□□ -0.57
PGK1-203ENST00000476531 PATJQ8NI35 1801 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 CFAP47Q6ZTR5 3102 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 PVALEFA0A1B0GWK0 134 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 SHISA7A6NL88 538 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 N4BP3O15049 544 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 SPTLC1O15269 473 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 LILRB5O75023 590 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 TBCAO75347 108 aaKnown RBP11.46□□□□□ -0.57
PGK1-203ENST00000476531 FAM13AO94988 1023 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 CD72P21854 359 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 NMT1P30419 496 aaKnown RBP11.46□□□□□ -0.57
PGK1-203ENST00000476531 OR1D2P34982 312 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 PRCPP42785 496 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 MAGEA9P43362 315 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 STX17P56962 302 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 PFKPQ01813 784 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 CSTF1Q05048 431 aaKnown RBP11.46□□□□□ -0.57
PGK1-203ENST00000476531 ELAVL2Q12926 359 aaKnown RBP11.46□□□□□ -0.57
PGK1-203ENST00000476531 FZD5Q13467 585 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 IQCB1Q15051 598 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 UVSSAQ2YD98 709 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 PABPC1LQ4VXU2 614 aaKnown RBP11.46□□□□□ -0.57
PGK1-203ENST00000476531 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.57
PGK1-203ENST00000476531 ZNF658Q5TYW1 1059 aaPredicted RBP11.46□□□□□ -0.57
PGK1-203ENST00000476531 EEF1DP3Q658K8 133 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 KLHL10Q6JEL2 608 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 PDXDC1Q6P996 788 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 DHX40Q8IX18 779 aaKnown RBP11.46□□□□□ -0.57
PGK1-203ENST00000476531 AOPEPQ8N6M6 819 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 TRIML1Q8N9V2 468 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 ZBTB44Q8NCP5 570 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 NELL1Q92832 810 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 CLDN23Q96B33 292 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 BORCS6Q96GS4 357 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 FIZ1Q96SL8 496 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 PLA2G2FQ9BZM2 168 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 LRRC27Q9C0I9 530 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 CCDC113Q9H0I3 377 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 MTRRQ9UBK8 725 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 PCDHGA2Q9Y5H1 932 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 NOTCH4Q99466 2003 aa11.46□□□□□ -0.57
PGK1-203ENST00000476531 MYH11P35749 1972 aa11.46□□□□□ -0.58
PGK1-203ENST00000476531 VWA8A3KMH1 1905 aa11.46□□□□□ -0.58
PGK1-203ENST00000476531 CACNA1BQ00975 2339 aa11.46□□□□□ -0.58
PGK1-203ENST00000476531 MIA3Q5JRA6 1907 aa11.45□□□□□ -0.58
PGK1-203ENST00000476531 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
PGK1-203ENST00000476531 TMEM189-UBE2V1I3L0A0 370 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms