RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CCT8L2Q96SF2 557 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 EPN3Q9H201 632 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 RASAL2Q9UJF2 1139 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 CNTN6Q9UQ52 1028 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 USTQ9Y2C2 406 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 A0A0G2JMZ2 1700 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 FSCN2O14926 492 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 YBX3P16989 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
TVP23B-202ENST00000476139 TBXAS1P24557 533 aaPredicted RBP17.71■□□□□ 0.43
TVP23B-202ENST00000476139 GJA5P36382 358 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 TAS2R40P59535 323 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 MAGOHP61326 146 aaKnown RBP17.71■□□□□ 0.43
TVP23B-202ENST00000476139 RPL7AP62424 266 aaKnown RBP17.71■□□□□ 0.43
TVP23B-202ENST00000476139 PLPPR4Q7Z2D5 763 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 DDX27Q96GQ7 796 aaKnown RBP17.71■□□□□ 0.43
TVP23B-202ENST00000476139 CPSF3Q9UKF6 684 aaKnown RBP17.71■□□□□ 0.43
TVP23B-202ENST00000476139 PODXLO00592 558 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 OGTO15294 1046 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 MYBL1P10243 752 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 PTP4A2Q12974 167 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 MTMR3Q13615 1198 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 TTC31Q49AM3 519 aaPredicted RBP17.7■□□□□ 0.42
TVP23B-202ENST00000476139 SGO2Q562F6 1265 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 EEF1DP3Q658K8 133 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 SCARA5Q6ZMJ2 495 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 ANKS1BQ7Z6G8 1248 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 TADA2BQ86TJ2 420 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 WDR49Q8IV35 697 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 MDM1Q8TC05 714 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 ZNF473Q8WTR7 871 aaKnown RBP17.7■□□□□ 0.42
TVP23B-202ENST00000476139 IMPG2Q9BZV3 1241 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 SEMA4AQ9H3S1 761 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 DICER1Q9UPY3 1922 aaKnown RBP17.7■□□□□ 0.42
TVP23B-202ENST00000476139 GJC1P36383 396 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 PMS2P54278 862 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 MCL1Q07820 350 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 PPIL2Q13356 520 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 NLRP14Q86W24 1093 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 ZBTB8OSQ8IWT0 167 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 TCP11Q8WWU5 503 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 MCM3APO60318 1980 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 TLR3O15455 904 aaKnown RBP17.7■□□□□ 0.42
TVP23B-202ENST00000476139 BRD2P25440 801 aaKnown RBP17.7■□□□□ 0.42
TVP23B-202ENST00000476139 SSR1P43307 286 aaKnown RBP17.7■□□□□ 0.42
TVP23B-202ENST00000476139 TRIP13Q15645 432 aaPredicted RBP17.7■□□□□ 0.42
TVP23B-202ENST00000476139 DUOXA2Q1HG44 320 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 ATP13A4Q4VNC1 1196 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 EFCAB13Q8IY85 973 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 PPM1EQ8WY54 764 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 RNF25Q96BH1 459 aaPredicted RBP17.7■□□□□ 0.42
TVP23B-202ENST00000476139 LRRC19Q9H756 370 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 CISHQ9NSE2 258 aa17.7■□□□□ 0.42
TVP23B-202ENST00000476139 R3HDM2Q9Y2K5 976 aaKnown RBP17.7■□□□□ 0.42
TVP23B-202ENST00000476139 DNAH12Q6ZR08 3092 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 PROSCO94903 275 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 HOXC6P09630 235 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 TCF4P15884 667 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 TMEM132AQ24JP5 1023 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 RNF187Q5TA31 235 aaPredicted RBP17.69■□□□□ 0.42
TVP23B-202ENST00000476139 CCDC50Q8IVM0 306 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 MYCBPAPQ8TBZ2 947 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 PTPRHQ9HD43 1115 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 A0A087WUV0 522 aaPredicted RBP17.69■□□□□ 0.42
TVP23B-202ENST00000476139 SLC29A2Q14542 456 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 ATF7IP2Q5U623 682 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 FBXW10Q5XX13 1052 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 KCNV1Q6PIU1 500 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 C1orf131Q8NDD1 294 aaKnown RBP17.69■□□□□ 0.42
TVP23B-202ENST00000476139 TRIM11Q96F44 468 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 MPHOSPH6Q99547 160 aaKnown RBP17.69■□□□□ 0.42
TVP23B-202ENST00000476139 KLHL11Q9NVR0 708 aa17.69■□□□□ 0.42
TVP23B-202ENST00000476139 TP73O15350 636 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 RALAP11233 206 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 SLC1A1P43005 524 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 ZNF132P52740 706 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 PPP1R7Q15435 360 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 ZNF568Q3ZCX4 644 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 LIN9Q5TKA1 542 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 PLEKHA7Q6IQ23 1121 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 PHF13Q86YI8 300 aaPredicted RBP17.68■□□□□ 0.42
TVP23B-202ENST00000476139 UBR7Q8N806 425 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 TFAP2BQ92481 460 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 PABPC3Q9H361 631 aaKnown RBP17.68■□□□□ 0.42
TVP23B-202ENST00000476139 ACKR2O00590 384 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 ERLIN2O94905 339 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 ECEL1O95672 775 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 OSBPP22059 807 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 FGFR4P22455 802 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 MKRN3Q13064 507 aaKnown RBP17.68■□□□□ 0.42
TVP23B-202ENST00000476139 IFT88Q13099 833 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 TRPC3Q13507 836 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 EAPPQ56P03 285 aaPredicted RBP17.68■□□□□ 0.42
TVP23B-202ENST00000476139 EMC10Q5UCC4 262 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 TSHZ1Q6ZSZ6 1077 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 KAT2BQ92831 832 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 FZD8Q9H461 694 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 SMARCAD1Q9H4L7 1026 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 SPON1Q9HCB6 807 aa17.68■□□□□ 0.42
TVP23B-202ENST00000476139 NXF1Q9UBU9 619 aaKnown RBP17.68■□□□□ 0.42
TVP23B-202ENST00000476139 SIP14410 1827 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms