RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 ADAM28Q9UKQ2 775 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 PCDHB12Q9Y5F1 795 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 SF3B1O75533 1304 aaKnown RBP eCLIP16.28■□□□□ 0.2
MCF2L-224ENST00000475524 LINC01553A4QN01 128 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 M0QZQ0 153 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 TULP1O00294 542 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-224ENST00000475524 KIF4AO95239 1232 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 EFEMP2O95967 443 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 KCNMA1Q12791 1236 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 SYCP1Q15431 976 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 LRIT3Q3SXY7 679 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 SPOUT1Q5T280 376 aaKnown RBP16.28■□□□□ 0.2
MCF2L-224ENST00000475524 CHRDL2Q6WN34 429 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 LIMS2Q7Z4I7 341 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 GPR65Q8IYL9 337 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 C3orf58Q8NDZ4 430 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 IGSF21Q96ID5 467 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 FAM84AQ96KN4 292 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 SUSD3Q96L08 255 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 PAAF1Q9BRP4 392 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 EDEM3Q9BZQ6 932 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 CYP3A43Q9HB55 503 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 MARCH5Q9NX47 278 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 SPG21Q9NZD8 308 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 APEX2Q9UBZ4 518 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 NUB1Q9Y5A7 615 aa16.28■□□□□ 0.2
MCF2L-224ENST00000475524 PPEF2O14830 753 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 SYN3O14994 580 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 TEX33O43247 280 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 BMPR1AP36894 532 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
MCF2L-224ENST00000475524 TNNC1P63316 161 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 PLCB3Q01970 1234 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 FAM109BQ6ICB4 259 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-224ENST00000475524 CD300LGQ6UXG3 332 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-224ENST00000475524 TMEM86AQ8N2M4 240 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 TOP6BLQ8N6T0 577 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 NUP58Q9BVL2 599 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 BCO2Q9BYV7 579 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 DSEQ9UL01 958 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 LZTS1Q9Y250 596 aa16.27■□□□□ 0.2
MCF2L-224ENST00000475524 LCHNA4D1U4 455 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 TACC1O75410 805 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 TADA2AO75478 443 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 CYP11A1P05108 521 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 ODC1P11926 461 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 SLC9A1P19634 815 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 TYMPP19971 482 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 CDC25BP30305 580 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 ZNF75DP51815 510 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 RABGGTBP53611 331 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 ERVK-21P61565 698 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 UBE3AQ05086 875 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 TRIM14Q14142 442 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 WDR72Q3MJ13 1102 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 DPY19L2P1Q6NXN4 242 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 TMEM169Q96HH4 297 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 TGS1Q96RS0 853 aaKnown RBP16.26■□□□□ 0.19
MCF2L-224ENST00000475524 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 PBX4Q9BYU1 374 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 APOBEC3GQ9HC16 384 aaKnown RBP16.26■□□□□ 0.19
MCF2L-224ENST00000475524 SIX2Q9NPC8 291 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 HCSTQ9UBK5 93 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 PCDHB8Q9UN66 801 aa16.26■□□□□ 0.19
MCF2L-224ENST00000475524 PRG3Q9Y2Y8 225 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-224ENST00000475524 PLXNA4Q9HCM2 1894 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 TMEM265A0A087WTH1 108 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 GRXCR1A8MXD5 290 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 SPTLC1O15269 473 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 AP5Z1O43299 807 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 CA3P07451 260 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 PLCB2Q00722 1185 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 KRT17Q04695 432 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 TIGD5Q53EQ6 642 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 KLHDC7AQ5VTJ3 777 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 SPECC1LQ69YQ0 1117 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 FUT10Q6P4F1 479 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 PDXDC1Q6P996 788 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-224ENST00000475524 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-224ENST00000475524 DDX53Q86TM3 631 aaKnown RBP16.25■□□□□ 0.19
MCF2L-224ENST00000475524 FMNL3Q8IVF7 1028 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 VSTM4Q8IW00 320 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 APPL2Q8NEU8 664 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 NEK11Q8NG66 645 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 SENP8Q96LD8 212 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 PI4K2AQ9BTU6 479 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 C11orf84Q9BUA3 381 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-224ENST00000475524 LSM14BQ9BX40 385 aaKnown RBP16.25■□□□□ 0.19
MCF2L-224ENST00000475524 OXCT2Q9BYC2 517 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-224ENST00000475524 GANQ9H2C0 597 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 CACNG4Q9UBN1 327 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 MYO6Q9UM54 1294 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 YBX2Q9Y2T7 364 aaKnown RBP16.25■□□□□ 0.19
MCF2L-224ENST00000475524 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.25■□□□□ 0.197e-7■□□□□ 11.2
MCF2L-224ENST00000475524 SNX9Q9Y5X1 595 aa16.25■□□□□ 0.19
MCF2L-224ENST00000475524 VWA8A3KMH1 1905 aa16.24■□□□□ 0.19
MCF2L-224ENST00000475524 A0A1W2PQJ5 194 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms