RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PTK7Q13308 1070 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 LRRN4CLQ8ND94 238 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 TSC1Q92574 1164 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 CALR3Q96L12 384 aaKnown RBP21.15■□□□□ 0.98
SSR1-204ENST00000474597 VRTNQ9H8Y1 702 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.15■□□□□ 0.98
SSR1-204ENST00000474597 ST3GAL5Q9UNP4 418 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 IPPQ9Y573 584 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 PTCH2Q9Y6C5 1203 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 V9GYY5 206 aaPredicted RBP21.15■□□□□ 0.98
SSR1-204ENST00000474597 CENPFP49454 3210 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 FRMPD3Q5JV73 1810 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 EFCAB8A8MWE9 144 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 GPR182O15218 404 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 XPOTO43592 962 aaKnown RBP21.15■□□□□ 0.98
SSR1-204ENST00000474597 PRLRP16471 622 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 TCP1P17987 556 aaKnown RBP21.15■□□□□ 0.98
SSR1-204ENST00000474597 ZNF132P52740 706 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 TNNC1P63316 161 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 MGAT3Q09327 533 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 MYO1EQ12965 1108 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 ZNF394Q53GI3 561 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 CXorf38Q8TB03 319 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 UBXN4Q92575 508 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 ARHGEF26Q96DR7 871 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 BCO2Q9BYV7 579 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 OSGEPQ9NPF4 335 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 CTTNBP2NLQ9P2B4 639 aa21.15■□□□□ 0.98
SSR1-204ENST00000474597 TLR3O15455 904 aaKnown RBP21.14■□□□□ 0.97
SSR1-204ENST00000474597 NCK2O43639 380 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 CKAP4Q07065 602 aaKnown RBP21.14■□□□□ 0.97
SSR1-204ENST00000474597 GLRA4Q5JXX5 417 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 ALKAL1Q6UXT8 129 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 DAAM2Q86T65 1068 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 HACE1Q8IYU2 909 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 TMEM130Q8N3G9 435 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 ARRDC4Q8NCT1 418 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 CAGE1Q8TC20 777 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 ZNF653Q96CK0 615 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 ZMAT2Q96NC0 199 aaKnown RBP21.14■□□□□ 0.97
SSR1-204ENST00000474597 TSPAN18Q96SJ8 248 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 CHST12Q9NRB3 414 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 TRMT13Q9NUP7 481 aaKnown RBP21.14■□□□□ 0.97
SSR1-204ENST00000474597 KLK14Q9P0G3 267 aa21.14■□□□□ 0.97
SSR1-204ENST00000474597 UBQLN1Q9UMX0 589 aaKnown RBP21.14■□□□□ 0.97
SSR1-204ENST00000474597 CTAGE15A4D2H0 777 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 TADA3O75528 432 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 STAU1O95793 577 aaKnown RBP21.13■□□□□ 0.97
SSR1-204ENST00000474597 CTAGE8P0CG41 777 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 NSFP46459 744 aaKnown RBP21.13■□□□□ 0.97
SSR1-204ENST00000474597 RAP1GAPP47736 663 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 MEI1Q5TIA1 1274 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 LHX8Q68G74 356 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 CTAGE6Q86UF2 777 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 CTAGE4Q8IX94 777 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 CAPZA3Q96KX2 299 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 OSBPL9Q96SU4 736 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 TLR10Q9BXR5 811 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 CYP3A43Q9HB55 503 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 UNGP13051 313 aaPredicted RBP21.13■□□□□ 0.97
SSR1-204ENST00000474597 ZSCAN20P17040 1043 aaPredicted RBP21.13■□□□□ 0.97
SSR1-204ENST00000474597 NAA35Q5VZE5 725 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 PPP1R2P3Q6NXS1 205 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 ZNF606Q8WXB4 792 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 GOLGA1Q92805 767 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 TRIM11Q96F44 468 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 MMS19Q96T76 1030 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 CXCL16Q9H2A7 254 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 SMYD3Q9H7B4 428 aa21.13■□□□□ 0.97
SSR1-204ENST00000474597 CYP1A1P04798 512 aaPredicted RBP21.12■□□□□ 0.97
SSR1-204ENST00000474597 NAA30Q147X3 362 aaPredicted RBP21.12■□□□□ 0.97
SSR1-204ENST00000474597 ZBTB6Q15916 424 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 PEX26Q7Z412 305 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 PASD1Q8IV76 773 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 LRRC57Q8N9N7 239 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 SMG8Q8ND04 991 aaKnown RBP21.12■□□□□ 0.97
SSR1-204ENST00000474597 CPA5Q8WXQ8 436 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 CYFIP2Q96F07 1278 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 PSMB7Q99436 277 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 STARD7Q9NQZ5 370 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 TUBGCP4Q9UGJ1 667 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 GTF3C4Q9UKN8 822 aa21.12■□□□□ 0.97
SSR1-204ENST00000474597 KBTBD13C9JR72 458 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 CD4P01730 458 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 TFRCP02786 760 aaKnown RBP21.11■□□□□ 0.97
SSR1-204ENST00000474597 ATF7P17544 494 aaPredicted RBP21.11■□□□□ 0.97
SSR1-204ENST00000474597 CDH8P55286 799 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 RPS6KA1Q15418 735 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 C18orf25Q96B23 403 aaPredicted RBP21.11■□□□□ 0.97
SSR1-204ENST00000474597 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.11■□□□□ 0.972e-9■■■■■ 37.6
SSR1-204ENST00000474597 RNF39Q9H2S5 420 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 PACSIN2Q9UNF0 486 aaPredicted RBP21.11■□□□□ 0.97
SSR1-204ENST00000474597 SMIM28A0A1B0GU29 152 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 A0A1W2PQ45 241 aaPredicted RBP21.11■□□□□ 0.97
SSR1-204ENST00000474597 A0A1W2PQY0 241 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 ZNF185O15231 689 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 GHRP10912 638 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 KCNE1P15382 129 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 BRD2P25440 801 aaKnown RBP21.11■□□□□ 0.97
SSR1-204ENST00000474597 SSTR3P32745 418 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms