RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 CDC26Q8NHZ8 85 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 GCNAQ96QF7 691 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 ISCUQ9H1K1 167 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 QPCTLQ9NXS2 382 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 ARHGEF35A5YM69 484 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 EPHB2P29323 1055 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 HSD17B3P37058 310 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 S100A12P80511 92 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 TAF5Q15542 800 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 BNC2Q6ZN30 1099 aaPredicted RBP9.39□□□□□ -0.91
COL6A3-210ENST00000473258 TTC30AQ86WT1 665 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 SMYD4Q8IYR2 804 aaPredicted RBP9.39□□□□□ -0.91
COL6A3-210ENST00000473258 LINC00301Q8NCQ3 95 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 OSBPL11Q9BXB4 747 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 TAGLN3Q9UI15 199 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 TRPC5OSA6NMA1 111 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 MTFR1Q15390 333 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 REXO1L1PQ8IX06 675 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 TTC39CQ8N584 583 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 DENND6BQ8NEG7 585 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 NSMCE3Q96MG7 304 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 CCDC115Q96NT0 180 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 RSPH9Q9H1X1 276 aaPredicted RBP9.39□□□□□ -0.91
COL6A3-210ENST00000473258 ZNF185O15231 689 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 COBLO75128 1261 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 TJP3O95049 919 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 GGPS1O95749 300 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 RALBP11234 206 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 FCGR1AP12314 374 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 ITIH1P19827 911 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 NAMPTP43490 491 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 PTPN5P54829 565 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 FKBP3Q00688 224 aaKnown RBP9.39□□□□□ -0.91
COL6A3-210ENST00000473258 TTLL12Q14166 644 aaPredicted RBP9.39□□□□□ -0.91
COL6A3-210ENST00000473258 TRADDQ15628 312 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 AOC3Q16853 763 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 ANKRD26P1Q6NSI1 321 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 LDHAL6AQ6ZMR3 332 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL6A3-210ENST00000473258 TSPYL6Q8N831 410 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 NEDD1Q8NHV4 660 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 BTN2A2Q8WVV5 523 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 MKNK1Q9BUB5 465 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 CINPQ9BW66 212 aaPredicted RBP9.39□□□□□ -0.91
COL6A3-210ENST00000473258 ZNF717Q9BY31 904 aaPredicted RBP9.39□□□□□ -0.91
COL6A3-210ENST00000473258 NDST4Q9H3R1 872 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 POFUT2Q9Y2G5 429 aa9.39□□□□□ -0.91
COL6A3-210ENST00000473258 ECE2O60344 883 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 NADKO95544 446 aaPredicted RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 RAP1GAPP47736 663 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 KPNA1P52294 538 aaPredicted RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 DYNLT1P63172 113 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 KCNMA1Q12791 1236 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 EDRF1Q3B7T1 1238 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 ZFP1Q6P2D0 407 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 FAM180AQ6UWF9 173 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 NLRP10Q86W26 655 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 HTRA1Q92743 480 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 OTUB1Q96FW1 271 aaPredicted RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 MTMR9Q96QG7 549 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 FAM118BQ9BPY3 351 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 TMEM161AQ9NX61 479 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 PSMC3IPQ9P2W1 217 aaPredicted RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 CRNNQ9UBG3 495 aaPredicted RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 FAM92AA1XBS5 289 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 B4E1Z4 1266 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 TNPO2O14787 897 aaKnown RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 SPTLC1O15269 473 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 HUS1O60921 280 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 TTLL1O95922 423 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 CYP2J2P51589 502 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 CABP4P57796 275 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 RESTQ13127 1097 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 EIF3MQ7L2H7 374 aaKnown RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 AGR3Q8TD06 166 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 LARP4BQ92615 738 aaKnown RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 SYMPKQ92797 1274 aaKnown RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 TMCC3Q9ULS5 477 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 MAP3K2Q9Y2U5 619 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 LEMD3Q9Y2U8 911 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 CAMSAP2Q08AD1 1489 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 KPNA3O00505 521 aaPredicted RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 PRKD3O94806 890 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 NOL4O94818 638 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 PARNO95453 639 aaKnown RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 THRAP10827 490 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 SPIRE1Q08AE8 756 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 RIPK1Q13546 671 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 SCARA3Q6AZY7 606 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 MTDHQ86UE4 582 aaKnown RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 GPBP1Q86WP2 473 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 ARID3BQ8IVW6 561 aaPredicted RBP9.38□□□□□ -0.91
COL6A3-210ENST00000473258 XXYLT1Q8NBI6 393 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 TTC13Q8NBP0 860 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 PJA1Q8NG27 643 aa9.38□□□□□ -0.91
COL6A3-210ENST00000473258 TAMM41Q96BW9 452 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms