RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	SMYD3	Q9H7B4	428 aa		11.52	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CHST12	Q9NRB3	414 aa		11.52	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CAPN6	Q9Y6Q1	641 aa		11.52	□□□□□ -0.57
MRPS18B-208	ENST00000472267	SMIM28	A0A1B0GU29	152 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	DNM1L	O00429	736 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ENC1	O14682	589 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	PPEF2	O14830	753 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	TLR3	O15455	904 aa	Known RBP	11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	FTL	P02792	175 aa	Predicted RBP	11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CKB	P12277	381 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ITGA4	P13612	1032 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	P4HA1	P13674	534 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CDH8	P55286	799 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	YWHAE	P62258	255 aa	Known RBP	11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	TNNC1	P63316	161 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	FAM26D	Q5JW98	314 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	HACE1	Q8IYU2	909 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	RNF10	Q8N5U6	811 aa	Known RBP	11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	UBR7	Q8N806	425 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	RNF169	Q8NCN4	708 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	TRIM58	Q8NG06	486 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	DDX1	Q92499	740 aa	Known RBP	11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	MMS19	Q96T76	1030 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	PAK6	Q9NQU5	681 aa	Predicted RBP	11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	FAM105A	Q9NUU6	356 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	INTU	Q9ULD6	942 aa		11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	UBQLN1	Q9UMX0	589 aa	Known RBP	11.51	□□□□□ -0.57
MRPS18B-208	ENST00000472267	MGEA5	O60502	916 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	RTN2	O75298	545 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	MYO1E	Q12965	1108 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ZBTB6	Q15916	424 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ZNF677	Q86XU0	584 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	PASD1	Q8IV76	773 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	LPP	Q93052	612 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	THAP2	Q9H0W7	228 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	SDCBP2	Q9H190	292 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CNTN6	Q9UQ52	1028 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	SCN1A	P35498	2009 aa		11.5	□□□□□ -0.57
MRPS18B-208	ENST00000472267	UQCRHL	A0A096LP55	91 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ANKRD62	A6NC57	917 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	MEIS3P2	A8K0S8	358 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	BTNL10	A8MVZ5	291 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	XPOT	O43592	962 aa	Known RBP	11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CAND2	O75155	1236 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	PALM	O75781	387 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ATP1A1	P05023	1023 aa	Known RBP	11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	UQCRH	P07919	91 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	TMEM253	P0C7T8	217 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	KCNE1	P15382	129 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	BRD2	P25440	801 aa	Known RBP	11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ZNF132	P52740	706 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	C1QTNF8	P60827	252 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ORC1	Q13415	861 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CLEC16A	Q2KHT3	1053 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	C9orf57	Q5W0N0	161 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	MYRIP	Q8NFW9	859 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ARHGEF26	Q96DR7	871 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ZFP42	Q96MM3	310 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ADAM2	Q99965	735 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	BCO2	Q9BYV7	579 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ISCU	Q9H1K1	167 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	GOLGA2P5	Q9HBQ8	144 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ATP8B3	O60423	1300 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CD4	P01730	458 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CFH	P08603	1231 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	GZMA	P12544	262 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CD19	P15391	556 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	MLH1	P40692	756 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	IFI16	Q16666	785 aa	Known RBP	11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	XKR4	Q5GH76	650 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	NAA35	Q5VZE5	725 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ACAD10	Q6JQN1	1059 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CPA5	Q8WXQ8	436 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CYFIP2	Q96F07	1278 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	RPS6KC1	Q96S38	1066 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	GAD1	Q99259	594 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	VRTN	Q9H8Y1	702 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	L2HGDH	Q9H9P8	463 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CYP3A43	Q9HB55	503 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	MRFAP1	Q9Y605	127 aa		11.49	□□□□□ -0.57
MRPS18B-208	ENST00000472267	NCAN	O14594	1321 aa		11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267		A0A0A6YYK5	440 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	GRID2IP	A4D2P6	1211 aa		11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	PTGES	O14684	152 aa		11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ATMIN	O43313	823 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	NCK2	O43639	380 aa		11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	PQBP1	O60828	265 aa	Known RBP	11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	SLU7	O95391	586 aa	Known RBP	11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	STAU1	O95793	577 aa	Known RBP	11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	FTCD	O95954	541 aa		11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	TFRC	P02786	760 aa	Known RBP	11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ATF7	P17544	494 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	CDK7	P50613	346 aa		11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	ATN1	P54259	1190 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	GPC5	P78333	572 aa		11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	SOX4	Q06945	474 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	DSC3	Q14574	896 aa		11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	TRAF7	Q6Q0C0	670 aa		11.48	□□□□□ -0.57
MRPS18B-208	ENST00000472267	LRRC52	Q8N7C0	313 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms