RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 HTRA4P83105 476 aaPredicted RBP20.61■□□□□ 0.89
PSPC1-203ENST00000471658 ZNF667Q5HYK9 610 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 FAM109BQ6ICB4 259 aaPredicted RBP20.61■□□□□ 0.89
PSPC1-203ENST00000471658 CCDC150Q8NCX0 1101 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 DDX27Q96GQ7 796 aaKnown RBP20.61■□□□□ 0.89
PSPC1-203ENST00000471658 PDLIM2Q96JY6 352 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 RNPC3Q96LT9 517 aaKnown RBP20.61■□□□□ 0.89
PSPC1-203ENST00000471658 UROC1Q96N76 676 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 SLC9A7Q96T83 725 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 NUP58Q9BVL2 599 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 MTIF3Q9H2K0 278 aaKnown RBP20.61■□□□□ 0.89
PSPC1-203ENST00000471658 VRTNQ9H8Y1 702 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 MRPL42Q9Y6G3 142 aaKnown RBP20.61■□□□□ 0.89
PSPC1-203ENST00000471658 I3L4J1 428 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 B3GAT3O94766 335 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 KIF4AO95239 1232 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 STAU1O95793 577 aaKnown RBP20.6■□□□□ 0.89
PSPC1-203ENST00000471658 GALTP07902 379 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 PNMA6AP0CW24 399 aaPredicted RBP20.6■□□□□ 0.89
PSPC1-203ENST00000471658 BRCC3P46736 316 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 RAP1GAPP47736 663 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 RABGGTBP53611 331 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 MYO1EQ12965 1108 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 RAPGEF1Q13905 1077 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 FIGNQ5HY92 759 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 DCLRE1AQ6PJP8 1040 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 PPFIBP1Q86W92 1011 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 CMTR2Q8IYT2 770 aaKnown RBP20.6■□□□□ 0.89
PSPC1-203ENST00000471658 PHOSPHO2Q8TCD6 241 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 BAP1Q92560 729 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 TAF4BQ92750 862 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 SDCBP2Q9H190 292 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 CEP72Q9P209 647 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 SNX9Q9Y5X1 595 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 TNRC18O15417 2968 aaPredicted RBP20.6■□□□□ 0.89
PSPC1-203ENST00000471658 CEP290O15078 2479 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 KPNA7A9QM74 516 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 ALDH2P05091 517 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 WEE2P0C1S8 567 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 ASPAP45381 313 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 ADKP55263 362 aaKnown RBP20.6■□□□□ 0.89
PSPC1-203ENST00000471658 CDH8P55286 799 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 BCAR1P56945 870 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 CUL2Q13617 745 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 ARID5BQ14865 1188 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 SPOUT1Q5T280 376 aaKnown RBP20.6■□□□□ 0.89
PSPC1-203ENST00000471658 ZNF560Q96MR9 790 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 NIF3L1Q9GZT8 377 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 SMYD3Q9H7B4 428 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 CAPN11Q9UMQ6 739 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 FAN1Q9Y2M0 1017 aa20.6■□□□□ 0.89
PSPC1-203ENST00000471658 LCHNA4D1U4 455 aa20.59■□□□□ 0.89
PSPC1-203ENST00000471658 PNPLA4P41247 253 aa20.59■□□□□ 0.89
PSPC1-203ENST00000471658 DRAP1Q14919 205 aaPredicted RBP20.59■□□□□ 0.89
PSPC1-203ENST00000471658 SV2CQ496J9 727 aa20.59■□□□□ 0.89
PSPC1-203ENST00000471658 TIGD5Q53EQ6 642 aa20.59■□□□□ 0.89
PSPC1-203ENST00000471658 CACNA2D4Q7Z3S7 1137 aa20.59■□□□□ 0.89
PSPC1-203ENST00000471658 TMEM173Q86WV6 379 aaPredicted RBP20.59■□□□□ 0.89
PSPC1-203ENST00000471658 RSPH1Q8WYR4 309 aa20.59■□□□□ 0.89
PSPC1-203ENST00000471658 MMS19Q96T76 1030 aa20.59■□□□□ 0.89
PSPC1-203ENST00000471658 GPR88Q9GZN0 384 aa20.59■□□□□ 0.89
PSPC1-203ENST00000471658 INSL6Q9Y581 213 aa20.59■□□□□ 0.89
PSPC1-203ENST00000471658 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.59■□□□□ 0.89
PSPC1-203ENST00000471658 TLL1O43897 1013 aa20.58■□□□□ 0.89
PSPC1-203ENST00000471658 MYOGP15173 224 aa20.58■□□□□ 0.89
PSPC1-203ENST00000471658 TNNC1P63316 161 aa20.58■□□□□ 0.89
PSPC1-203ENST00000471658 BCL7CQ8WUZ0 217 aaPredicted RBP20.58■□□□□ 0.89
PSPC1-203ENST00000471658 RAD9AQ99638 391 aa20.58■□□□□ 0.89
PSPC1-203ENST00000471658 TMEM175Q9BSA9 504 aa20.58■□□□□ 0.89
PSPC1-203ENST00000471658 MARCH5Q9NX47 278 aa20.58■□□□□ 0.89
PSPC1-203ENST00000471658 FBXL5Q9UKA1 691 aa20.58■□□□□ 0.89
PSPC1-203ENST00000471658 FOXN3O00409 490 aaPredicted RBP20.57■□□□□ 0.88
PSPC1-203ENST00000471658 CD58P19256 250 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 MFAP3P55082 362 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 JAM2P57087 298 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 GCNT1Q02742 428 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 TRIM14Q14142 442 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 DSTYKQ6XUX3 929 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 SENP8Q96LD8 212 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 STK33Q9BYT3 514 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 BCO2Q9BYV7 579 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 GDAP2Q9NXN4 497 aa20.57■□□□□ 0.88
PSPC1-203ENST00000471658 A0A1W2PQJ5 194 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 LRRC53A6NM62 1247 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 CYB561D2O14569 222 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 TADA2AO75478 443 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 ACO1P21399 889 aaKnown RBP20.56■□□□□ 0.88
PSPC1-203ENST00000471658 KRT9P35527 623 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 AARSP49588 968 aaKnown RBP eCLIP20.56■□□□□ 0.88
PSPC1-203ENST00000471658 SOWAHAQ2M3V2 549 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 PDXDC1Q6P996 788 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 CCDC186Q7Z3E2 898 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 FIBCD1Q8N539 461 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 TC2NQ8N9U0 490 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 MRPL45Q9BRJ2 306 aaKnown RBP20.56■□□□□ 0.88
PSPC1-203ENST00000471658 COLEC11Q9BWP8 271 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 EDEM3Q9BZQ6 932 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 IMPACTQ9P2X3 320 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 L1RE1Q9UN81 338 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 LUC7L2Q9Y383 392 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms