RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 PGLYRP2Q96PD5 576 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 USP28Q96RU2 1077 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 ZHX3Q9H4I2 956 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 PLEKHA5Q9HAU0 1116 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 PARVGQ9HBI0 331 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 AVENQ9NQS1 362 aaPredicted RBP10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 LARSQ9P2J5 1176 aaKnown RBP10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 KCNH3Q9ULD8 1083 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 ODF2LQ9ULJ1 636 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 MTMR6Q9Y217 621 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 SLC27A5Q9Y2P5 690 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 KIF3AQ9Y496 699 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 NUB1Q9Y5A7 615 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 R4GN57 208 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 ZNF292O60281 2723 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 SPTBN4Q9H254 2564 aa10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 PDCD11Q14690 1871 aaKnown RBP10.64□□□□□ -0.71
RPRD1B-204ENST00000471511 GPR179Q6PRD1 2367 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 MYH15Q9Y2K3 1946 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 PIRO00625 290 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 FAM13AO94988 1023 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 CYP3A5P20815 502 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 VIPR2P41587 438 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 MATR3P43243 847 aaKnown RBP eCLIP10.63□□□□□ -0.719e-6■■□□□ 13
RPRD1B-204ENST00000471511 LIG4P49917 911 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 CASP5P51878 434 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 LILRA4P59901 499 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 STXBP5Q5T5C0 1151 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 SPATA1Q5VX52 437 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 ZNF720Q7Z2F6 126 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 BRAPQ7Z569 592 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 LRRTM3Q86VH5 581 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 SFR1Q86XK3 245 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 TMC8Q8IU68 726 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 EFCAB13Q8IY85 973 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 ATAD1Q8NBU5 361 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 GLIS3Q8NEA6 775 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 OR10T2Q8NGX3 314 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 SHKBP1Q8TBC3 707 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 LARP4BQ92615 738 aaKnown RBP10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 FAM212AQ96EL1 285 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 BICD1Q96G01 975 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 CALML4Q96GE6 196 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 MSTO1Q9BUK6 570 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 TBC1D7Q9P0N9 293 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 AFF4Q9UHB7 1163 aaKnown RBP10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 UBQLN1Q9UMX0 589 aaKnown RBP10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 SIT1Q9Y3P8 196 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 SRPRBQ9Y5M8 271 aaKnown RBP10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 STYXL1Q9Y6J8 313 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 ZFP37Q9Y6Q3 630 aaPredicted RBP10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 CITO14578 2027 aa10.63□□□□□ -0.71
RPRD1B-204ENST00000471511 CACNA1IQ9P0X4 2223 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 EP300Q09472 2414 aaPredicted RBP10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 ANO9A1A5B4 782 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 H7C4K7 107 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 PRRG1O14668 218 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 HNRNPDLO14979 420 aaKnown RBP10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 SLC26A4O43511 780 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 LRG1P02750 347 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 HOXC13P31276 330 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 EPHA5P54756 1037 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 DUSP4Q13115 394 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 GRM2Q14416 872 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 TEAD2Q15562 447 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 MLF2Q15773 248 aaPredicted RBP10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 WDR44Q5JSH3 913 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 C9orf57Q5W0N0 161 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 TPGS2Q68CL5 300 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 CENPPQ6IPU0 288 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 ZNF280DQ6N043 979 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 VITQ6UXI7 678 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 RTL10Q7L3V2 364 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 PJA1Q8NG27 643 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 HPS3Q969F9 1004 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 SENP8Q96LD8 212 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 MKNK1Q9BUB5 465 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 BACH2Q9BYV9 841 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 ST6GALNAC4Q9H4F1 302 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 RPF1Q9H9Y2 349 aaKnown RBP10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 ZNF334Q9HCZ1 680 aaPredicted RBP10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 HEBP1Q9NRV9 189 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 YIPF1Q9Y548 306 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 MYH11P35749 1972 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 FAM186AA6NE01 2351 aa10.62□□□□□ -0.71
RPRD1B-204ENST00000471511 KANSL1LA0AUZ9 987 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 MTMR11A4FU01 709 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 ECI2O75521 394 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 SP9P0CG40 484 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 MYL4P12829 197 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 TARSP26639 723 aaKnown RBP10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 ELF1P32519 619 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 PPP2R3AQ06190 1150 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 GPR17Q13304 367 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 CCDC142Q17RM4 750 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 MTSS1LQ765P7 747 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 APPL2Q8NEU8 664 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 CXorf38Q8TB03 319 aa10.61□□□□□ -0.71
RPRD1B-204ENST00000471511 ASB16Q96NS5 453 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms