RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 KRT86O43790 486 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 KIF5CO60282 957 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 TSPAN1O60635 241 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 STAU1O95793 577 aaKnown RBP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 SLC9A1P19634 815 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 CTNNB1P35222 781 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 SOX5P35711 763 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 GRM5P41594 1212 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 MATR3P43243 847 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 GCLMP48507 274 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 KLK7P49862 253 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 NLRP11P59045 1033 aaKnown RBP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 BPIFB4P59827 614 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 ZNF200P98182 395 aaPredicted RBP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 ZP2Q05996 745 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 KLHL30Q0D2K2 578 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 SMAD2Q15796 467 aaKnown RBP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 SLC18A3Q16572 532 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 ARHGAP29Q52LW3 1261 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 TCEAL5Q5H9L2 206 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 WDR44Q5JSH3 913 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 IQCEQ6IPM2 695 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 SLC27A1Q6PCB7 646 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 ALYREFQ86V81 257 aaKnown RBP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 KIF18AQ8NI77 898 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 PLEKHO2Q8TD55 490 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 SHC3Q92529 594 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 CLP1Q92989 425 aaKnown RBP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 TRAIPQ9BWF2 469 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 CDT1Q9H211 546 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 PDZD7Q9H5P4 517 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 RPF1Q9H9Y2 349 aaKnown RBP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 CD320Q9NPF0 282 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 CHST12Q9NRB3 414 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 TOPORSQ9NS56 1045 aaPredicted RBP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 C1orf112Q9NSG2 853 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 ARHGAP20Q9P2F6 1191 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 FHOD1Q9Y613 1164 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 MICAL3Q7RTP6 2002 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 COL4A6Q14031 1691 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 GOLGA8IPA6NC78 632 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 GOLGA8JA6NMD2 632 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 PJA2O43164 708 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 AKR1B10O60218 316 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 C4BPAP04003 597 aaKnown RBP9.83□□□□□ -0.84
PTPRE-207ENST00000471218 VTNP04004 478 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 STAG3L1P0CL83 205 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 ARF4P18085 180 aaPredicted RBP9.83□□□□□ -0.84
PTPRE-207ENST00000471218 TNNI1P19237 187 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 ATICP31939 592 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 KIF11P52732 1056 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 VAV2P52735 878 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 YWHAEP62258 255 aaKnown RBP9.83□□□□□ -0.84
PTPRE-207ENST00000471218 DLG4P78352 724 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 SMAD4Q13485 552 aaKnown RBP9.83□□□□□ -0.84
PTPRE-207ENST00000471218 RAPGEF1Q13905 1077 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 TMEM132AQ24JP5 1023 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 CTC1Q2NKJ3 1217 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 TOGARAM2Q6ZUX3 1019 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 IRF2BP2Q7Z5L9 587 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 BMP8AQ7Z5Y6 402 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 SPRED2Q7Z698 418 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 ZNF677Q86XU0 584 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 REXO1L1PQ8IX06 675 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 FAM71AQ8IYT1 594 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 HACE1Q8IYU2 909 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 RNF10Q8N5U6 811 aaKnown RBP9.83□□□□□ -0.84
PTPRE-207ENST00000471218 RDH13Q8NBN7 331 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 KHSRPQ92945 711 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTPRE-207ENST00000471218 CCDC127Q96BQ5 260 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 ANKRD36BP1Q96IX9 119 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 CCDC94Q9BW85 323 aaPredicted RBP9.83□□□□□ -0.84
PTPRE-207ENST00000471218 HAPLN2Q9GZV7 340 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 MINDY3Q9H8M7 445 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 NLRC4Q9NPP4 1024 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 DNAJC12Q9UKB3 198 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 CNTN6Q9UQ52 1028 aa9.83□□□□□ -0.84
PTPRE-207ENST00000471218 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 XPOTO43592 962 aaKnown RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 ASS1P00966 412 aaKnown RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 TNNC2P02585 160 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 EDN1P05305 212 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 DLATP10515 647 aaKnown RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 PAX3P23760 479 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 EIF4A3P38919 411 aaKnown RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 ACOT2P49753 483 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 MRPS6P82932 125 aaKnown RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 GOLGA8FQ08AF8 430 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 GOLGA8DPQ0D2H9 430 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 KIF5AQ12840 1032 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 NCOA4Q13772 614 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 BTG3Q14201 252 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 DRAP1Q14919 205 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 ENOX2Q16206 610 aaKnown RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 IFI16Q16666 785 aaKnown RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 PTPN21Q16825 1174 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 SGSM1Q2NKQ1 1148 aa9.82□□□□□ -0.84
PTPRE-207ENST00000471218 TDRD12Q587J7 1177 aaKnown RBP9.82□□□□□ -0.84
PTPRE-207ENST00000471218 PDE12Q6L8Q7 609 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms