RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 FAM43BQ6ZT52 329 aaPredicted RBP7.21□□□□□ -1.26
VAMP3-202ENST00000470357 INTS8Q75QN2 995 aaKnown RBP7.21□□□□□ -1.26
VAMP3-202ENST00000470357 C16orf59Q7L2K0 433 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 TREML1Q86YW5 311 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 IRF2BP1Q8IU81 584 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 FAM186BQ8IYM0 893 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 TRAPPC12Q8WVT3 735 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 POMGNT1Q8WZA1 660 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 BHMTQ93088 406 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 LENG1Q96BZ8 264 aaPredicted RBP7.21□□□□□ -1.26
VAMP3-202ENST00000470357 TRIM44Q96DX7 344 aaPredicted RBP7.21□□□□□ -1.26
VAMP3-202ENST00000470357 NLRP4Q96MN2 994 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 TUBGCP2Q9BSJ2 902 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 NOC4LQ9BVI4 516 aaKnown RBP7.21□□□□□ -1.26
VAMP3-202ENST00000470357 GCOM2Q9BZD3 368 aaPredicted RBP7.21□□□□□ -1.26
VAMP3-202ENST00000470357 GSX2Q9BZM3 304 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 FZD8Q9H461 694 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 SETD4Q9NVD3 440 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 GTF2IRD1Q9UHL9 959 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.21□□□□□ -1.26
VAMP3-202ENST00000470357 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.21□□□□□ -1.26
VAMP3-202ENST00000470357 STYXL1Q9Y6J8 313 aa7.21□□□□□ -1.26
VAMP3-202ENST00000470357 MYADML2A6NDP7 307 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 INO80B-WBP1J3KQ70 363 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 PES1O00541 588 aaKnown RBP7.2□□□□□ -1.26
VAMP3-202ENST00000470357 ACKR2O00590 384 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 TNFRSF10BO14763 440 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 CLIC2O15247 247 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 CLDN3O15551 220 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 N4BP1O75113 896 aaKnown RBP7.2□□□□□ -1.26
VAMP3-202ENST00000470357 CAND2O75155 1236 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 SIN3BO75182 1162 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 TOM1L1O75674 476 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 ERLIN2O94905 339 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 CLTBP09497 229 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 AXLP30530 894 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 CYP2J2P51589 502 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 GPC3P51654 580 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 ARSDP51689 593 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 ACLYP53396 1101 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 SNRPNP63162 240 aaKnown RBP7.2□□□□□ -1.26
VAMP3-202ENST00000470357 UBXN1Q04323 297 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 KCNA1Q09470 495 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 FAAP100Q0VG06 881 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 CETN1Q12798 172 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 PRPF4BQ13523 1007 aaKnown RBP7.2□□□□□ -1.26
VAMP3-202ENST00000470357 NR1I3Q14994 352 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 VWA3BQ502W6 1294 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 HSP90AA4PQ58FG1 418 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 FAM47CQ5HY64 1035 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 SPECC1LQ69YQ0 1117 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 CCSAPQ6IQ19 270 aaPredicted RBP7.2□□□□□ -1.26
VAMP3-202ENST00000470357 TSHZ1Q6ZSZ6 1077 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 RPAINQ86UA6 219 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 TRIM59Q8IWR1 403 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 ETFBKMTQ8IXQ9 262 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 KIAA0319LQ8IZA0 1049 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 GPD1LQ8N335 351 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 TIFAQ96CG3 184 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 UHRF1Q96T88 793 aaPredicted RBP7.2□□□□□ -1.26
VAMP3-202ENST00000470357 KIFC3Q9BVG8 833 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 NUP58Q9BVL2 599 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 PBX4Q9BYU1 374 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 CCDC113Q9H0I3 377 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 VPS16Q9H269 839 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 NDST4Q9H3R1 872 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 TAB2Q9NYJ8 693 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 HSPBP1Q9NZL4 362 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 HDAC6Q9UBN7 1215 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 DAAM1Q9Y4D1 1078 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 ITIH6Q6UXX5 1313 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 ADGRA3Q8IWK6 1321 aa7.2□□□□□ -1.26
VAMP3-202ENST00000470357 TRANK1O15050 2925 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 A0A087WZ62 844 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 A0A0U1RQG5 324 aaPredicted RBP7.19□□□□□ -1.26
VAMP3-202ENST00000470357 GTPBP10A4D1E9 387 aaKnown RBP7.19□□□□□ -1.26
VAMP3-202ENST00000470357 ZNF233A6NK53 670 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 GRXCR1A8MXD5 290 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 P4HA2O15460 535 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 AP5Z1O43299 807 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 EXTL3O43909 919 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 AKAP3O75969 853 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 AFPP02771 609 aaKnown RBP7.19□□□□□ -1.26
VAMP3-202ENST00000470357 EPB42P16452 691 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 SFPQP23246 707 aaKnown RBP eCLIP7.19□□□□□ -1.26
VAMP3-202ENST00000470357 GTF2H1P32780 548 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 MATR3P43243 847 aaKnown RBP eCLIP7.19□□□□□ -1.26
VAMP3-202ENST00000470357 CRYBB1P53674 252 aaPredicted RBP7.19□□□□□ -1.26
VAMP3-202ENST00000470357 NLRP11P59045 1033 aaKnown RBP7.19□□□□□ -1.26
VAMP3-202ENST00000470357 MRPS5P82675 430 aaKnown RBP7.19□□□□□ -1.26
VAMP3-202ENST00000470357 MBTD1Q05BQ5 628 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 BFSP1Q12934 665 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 DRP2Q13474 957 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 ITGA7Q13683 1181 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 CCINQ13939 588 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 SURF1Q15526 300 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 ATF7IP2Q5U623 682 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 MPZL3Q6UWV2 235 aa7.19□□□□□ -1.26
VAMP3-202ENST00000470357 APTXQ7Z2E3 356 aaKnown RBP7.19□□□□□ -1.26
VAMP3-202ENST00000470357 ANKRD33Q7Z3H0 272 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms