RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 GABRQQ9UN88 632 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 GINS2Q9Y248 185 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 SCN1AP35498 2009 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 UMODL1Q5DID0 1318 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 PGRMC1O00264 195 aaKnown RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 KCNK3O14649 394 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 TREHO43280 583 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 BUB1BO60566 1050 aaPredicted RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 HMGCRP04035 888 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 ITGB3P05106 788 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 CALB1P05937 261 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 PAEPP09466 180 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 UNGP13051 313 aaPredicted RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 ATF7P17544 494 aaPredicted RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 ASPAP45381 313 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 TNNC1P63316 161 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 NOMO3P69849 1222 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 MRPS6P82932 125 aaKnown RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 RBP5P82980 135 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 C1QBPQ07021 282 aaKnown RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 TMEM62Q0P6H9 643 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 MYO1EQ12965 1108 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 ARHGEF6Q15052 776 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 MAP9Q49MG5 647 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 GNASQ5JWF2 1037 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 SCARA5Q6ZMJ2 495 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 NT5DC3Q86UY8 548 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 TMEM192Q8IY95 271 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 HACE1Q8IYU2 909 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 C1orf127Q8N9H9 656 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 PCSK9Q8NBP7 692 aaKnown RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 BEST2Q8NFU1 509 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 COG1Q8WTW3 980 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 KIF12Q96FN5 646 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 HES6Q96HZ4 224 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 RPS6KC1Q96S38 1066 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 NUP85Q9BW27 656 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 PLVAPQ9BX97 442 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 BCO2Q9BYV7 579 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 ZNF518BQ9C0D4 1074 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 ARHGAP39Q9C0H5 1083 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 XYLT2Q9H1B5 865 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 CARD9Q9H257 536 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 MRPL47Q9HD33 250 aaKnown RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 OSGEPQ9NPF4 335 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 XPNPEP3Q9NQH7 507 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 CISHQ9NSE2 258 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 CNOT8Q9UFF9 292 aaKnown RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 GTF2IRD1Q9UHL9 959 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 PIN4Q9Y237 131 aaKnown RBP9.97□□□□□ -0.81
SMC1A-205ENST00000469129 TRPV2Q9Y5S1 764 aa9.97□□□□□ -0.81
SMC1A-205ENST00000469129 TSC2P49815 1807 aa9.96□□□□□ -0.81
SMC1A-205ENST00000469129 CCDC188H7C350 402 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 ZNF185O15231 689 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 TLR3O15455 904 aaKnown RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 ADAMTS4O75173 837 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 CSDE1O75534 798 aaKnown RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 CABYRO75952 493 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 CST3P01034 146 aaPredicted RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 PRKAR2AP13861 404 aaKnown RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 CD58P19256 250 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 POLR2BP30876 1174 aaKnown RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 PTPN11Q06124 597 aaPredicted RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 SLC10A6Q3KNW5 377 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 GLE1Q53GS7 698 aaKnown RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 WDR93Q6P2C0 686 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 MON1BQ7L1V2 547 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 SESTD1Q86VW0 696 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 PHF13Q86YI8 300 aaPredicted RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 MCOLN2Q8IZK6 566 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 LRRC52Q8N7C0 313 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 SPATA4Q8NEY3 305 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 ACTRT1Q8TDG2 376 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 ZNF296Q8WUU4 475 aaPredicted RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 ZNF560Q96MR9 790 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 PSMB7Q99436 277 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 CELF4Q9BZC1 486 aaKnown RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 WNT8AQ9H1J5 351 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 ABCB6Q9NP58 842 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 DPP3Q9NY33 737 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 CNTN3Q9P232 1028 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 SRRDQ9UH36 339 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 SIX4Q9UIU6 781 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 RAB21Q9UL25 225 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 UBQLN1Q9UMX0 589 aaKnown RBP9.96□□□□□ -0.82
SMC1A-205ENST00000469129 PCDHGC3Q9UN70 934 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 STXBP5LQ9Y2K9 1186 aa9.96□□□□□ -0.82
SMC1A-205ENST00000469129 GOLGA6L10A0A0M3HER8 536 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 CCDC66A2RUB6 948 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 MYADML2A6NDP7 307 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 ATP8B1O43520 1251 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 SPOPO43791 374 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 FKTNO75072 461 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 CD4P01730 458 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 TFRCP02786 760 aaKnown RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 RHOXF2BP0C7M4 288 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 ZSCAN20P17040 1043 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 FGFR4P22455 802 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 CTNNA2P26232 953 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms