RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 RDH13Q8NBN7 331 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 C3orf58Q8NDZ4 430 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 PARD3BQ8TEW8 1205 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 HASPINQ8TF76 798 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 PPM1EQ8WY54 764 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 KLHL5Q96PQ7 755 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 RHOBTB2Q9BYZ6 727 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 MTMR12Q9C0I1 747 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 CLDND1Q9NY35 253 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 MTRRQ9UBK8 725 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 MAPK8IP1Q9UQF2 711 aa9.23□□□□□ -0.93
SSBP1-208ENST00000469123 KPNA7A9QM74 516 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 TEX28O15482 410 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 STAU1O95793 577 aaKnown RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 CYP11A1P05108 521 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 CNPP09543 421 aaKnown RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 P4HA1P13674 534 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 POLR2BP30876 1174 aaKnown RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 BRCC3P46736 316 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 CLCN4P51793 760 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 VAMP7P51809 220 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 YWHAHQ04917 246 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 ITIH3Q06033 890 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 SPAG1Q07617 926 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 BFSP1Q12934 665 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 TRPC3Q13507 836 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 MRPL58Q14197 206 aaKnown RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 CAMK4Q16566 473 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 RTP2Q5QGT7 225 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 CCDC183Q5T5S1 534 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 TPGS2Q68CL5 300 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 SLC8B1Q6J4K2 584 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 DPH6Q7L8W6 267 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 ADGRD2Q7Z7M1 963 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 SMYD4Q8IYR2 804 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 CSGALNACT2Q8N6G5 542 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 TOP6BLQ8N6T0 577 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 CMASQ8NFW8 434 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 LNX1Q8TBB1 728 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 NELFBQ8WX92 580 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 TAF4BQ92750 862 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 ERCC4Q92889 916 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-208ENST00000469123 CCDC127Q96BQ5 260 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 FAXDC2Q96IV6 333 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 SENP8Q96LD8 212 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 IGFLR1Q9H665 355 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 VRTNQ9H8Y1 702 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 SFXN1Q9H9B4 322 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 GDAP2Q9NXN4 497 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 RWDD2AQ9UIY3 292 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 CD207Q9UJ71 328 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 HCFC2Q9Y5Z7 792 aa9.22□□□□□ -0.93
SSBP1-208ENST00000469123 F8W810 466 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 C2CD2LO14523 706 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 HUS1O60921 280 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 N4BP1O75113 896 aaKnown RBP9.21□□□□□ -0.94
SSBP1-208ENST00000469123 PHACTR2O75167 634 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 AKAP3O75969 853 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 CSPG5O95196 566 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 PAPLNO95428 1278 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 ITGB3P05106 788 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 KRT19P08727 400 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 POU2F2P09086 479 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 ERCC5P28715 1186 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-208ENST00000469123 TKTP29401 623 aaKnown RBP9.21□□□□□ -0.94
SSBP1-208ENST00000469123 HOXA9P31269 272 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 CETN1Q12798 172 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 SMAD4Q13485 552 aaKnown RBP9.21□□□□□ -0.94
SSBP1-208ENST00000469123 RAB33AQ14088 237 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 UVSSAQ2YD98 709 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 ZACNQ401N2 412 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 CTXN3Q4LDR2 81 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 LIN9Q5TKA1 542 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 ANKRD40Q6AI12 368 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 OVOS1Q6IE37 1185 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 CES5AQ6NT32 575 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 TTI2Q6NXR4 508 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 C15orf39Q6ZRI6 1047 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 RBM43Q6ZSC3 357 aaKnown RBP9.21□□□□□ -0.94
SSBP1-208ENST00000469123 CCDC149Q6ZUS6 474 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 TAS1R1Q7RTX1 841 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 TRAPPC11Q7Z392 1133 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 FRMD5Q7Z6J6 570 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 FILIP1Q7Z7B0 1213 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 RBM23Q86U06 439 aaKnown RBP9.21□□□□□ -0.94
SSBP1-208ENST00000469123 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.21□□□□□ -0.94
SSBP1-208ENST00000469123 THEM5Q8N1Q8 247 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 CCDC150Q8NCX0 1101 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 ZSWIM2Q8NEG5 633 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 CXorf38Q8TB03 319 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 SLC22A17Q8WUG5 538 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 RABGGTAQ92696 567 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 NECTIN4Q96NY8 510 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 IMPG2Q9BZV3 1241 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 FAM124BQ9H5Z6 455 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-208ENST00000469123 ZDHHC7Q9NXF8 308 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 CACNG4Q9UBN1 327 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 SIX4Q9UIU6 781 aa9.21□□□□□ -0.94
SSBP1-208ENST00000469123 AGAP1Q9UPQ3 857 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms