RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 M0QZQ0 153 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 NRG2O14511 850 aaPredicted RBP18.79■□□□□ 0.6
TRIM56-203ENST00000467847 MYL4P12829 197 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 LRPAP1P30533 357 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 TNFSF9P41273 254 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 RPS9P46781 194 aaKnown RBP18.79■□□□□ 0.6
TRIM56-203ENST00000467847 LIG4P49917 911 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 ARSHQ5FYA8 562 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 HAUS6Q7Z4H7 955 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 SUMF1Q8NBK3 374 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 LEMD2Q8NC56 503 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 ATRIPQ8WXE1 791 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 SMARCD2Q92925 531 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 ZSWIM3Q96MP5 696 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 DLL3Q9NYJ7 618 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 UBQLN1Q9UMX0 589 aaKnown RBP18.79■□□□□ 0.6
TRIM56-203ENST00000467847 PCDHGA2Q9Y5H1 932 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 TIMM13Q9Y5L4 95 aaPredicted RBP18.79■□□□□ 0.6
TRIM56-203ENST00000467847 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.79■□□□□ 0.6
TRIM56-203ENST00000467847 DNAH14Q0VDD8 3507 aa18.79■□□□□ 0.6
TRIM56-203ENST00000467847 CACNA1BQ00975 2339 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 MAN2B1O00754 1011 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 HNRNPDLO14979 420 aaKnown RBP18.78■□□□□ 0.6
TRIM56-203ENST00000467847 SPTLC1O15269 473 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 OAZ2O95190 189 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 PSMC3P17980 439 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 CYP3A5P20815 502 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 GJB2P29033 226 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 ZBTB6Q15916 424 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 KYAT1Q16773 422 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 RSPO4Q2I0M5 234 aaPredicted RBP18.78■□□□□ 0.6
TRIM56-203ENST00000467847 USP37Q86T82 979 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 DCLK2Q8N568 766 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 IRF7Q92985 503 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 BORCS6Q96GS4 357 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 TMX3Q96JJ7 454 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 PGLYRP2Q96PD5 576 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 REEP2Q9BRK0 252 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 OXCT2Q9BYC2 517 aaPredicted RBP18.78■□□□□ 0.6
TRIM56-203ENST00000467847 ODF2LQ9ULJ1 636 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 NDRG2Q9UN36 371 aaKnown RBP18.78■□□□□ 0.6
TRIM56-203ENST00000467847 YIPF1Q9Y548 306 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 EPG5Q9HCE0 2579 aa18.78■□□□□ 0.6
TRIM56-203ENST00000467847 COL4A2P08572 1712 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 SHISA7A6NL88 538 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 LACTBL1A8MY62 500 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 XPOTO43592 962 aaKnown RBP18.77■□□□□ 0.6
TRIM56-203ENST00000467847 MOSPD3O75425 235 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 OR4Q2P0C623 313 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 GJA1P17302 382 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 GDI1P31150 447 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 VIPR2P41587 438 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 AARSP49588 968 aaKnown RBP eCLIP18.77■□□□□ 0.6
TRIM56-203ENST00000467847 GUCY2FP51841 1108 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 EPHA5P54756 1037 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 DHX8Q14562 1220 aaKnown RBP18.77■□□□□ 0.6
TRIM56-203ENST00000467847 VITQ6UXI7 678 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 DSTYKQ6XUX3 929 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 GPBP1Q86WP2 473 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 MYCT1Q8N699 235 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 ZSCAN18Q8TBC5 510 aaPredicted RBP18.77■□□□□ 0.6
TRIM56-203ENST00000467847 CALML4Q96GE6 196 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 AK8Q96MA6 479 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 SLITRK6Q9H5Y7 841 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 ZSCAN32Q9NX65 697 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 TBX20Q9UMR3 447 aa18.77■□□□□ 0.6
TRIM56-203ENST00000467847 ANK1P16157 1881 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 OR6C75A6NL08 312 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 K7ENM7 598 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 SLC26A4O43511 780 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 FAM13AO94988 1023 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 SDHBP21912 280 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 SCP2P22307 547 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 UBA7P41226 1012 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 MTAPQ13126 283 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 PLD1Q13393 1074 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 FZD5Q13467 585 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 TEAD2Q15562 447 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 ENOX2Q16206 610 aaKnown RBP18.76■□□□□ 0.59
TRIM56-203ENST00000467847 TSSK4Q6SA08 328 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 MAP4K3Q8IVH8 894 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 BEST2Q8NFU1 509 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 DEPDC1BQ8WUY9 529 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 KCNN1Q92952 543 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 RPF1Q9H9Y2 349 aaKnown RBP18.76■□□□□ 0.59
TRIM56-203ENST00000467847 ZNF334Q9HCZ1 680 aaPredicted RBP18.76■□□□□ 0.59
TRIM56-203ENST00000467847 NCDNQ9UBB6 729 aa18.76■□□□□ 0.59
TRIM56-203ENST00000467847 ZNF263O14978 683 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 OGTO15294 1046 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 FAM189A1O60320 539 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 VNN2O95498 520 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 KRT18P05783 430 aaKnown RBP18.75■□□□□ 0.59
TRIM56-203ENST00000467847 EPHB3P54753 998 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 DUSP4Q13115 394 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 OVOS1Q6IE37 1185 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 ZBTB44Q8NCP5 570 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 SHKBP1Q8TBC3 707 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 FAM212AQ96EL1 285 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 TSPAN18Q96SJ8 248 aa18.75■□□□□ 0.59
TRIM56-203ENST00000467847 MSTO1Q9BUK6 570 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms