RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 SDCBP2Q9H190 292 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 RSAD1Q9HA92 442 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 GOLGA2P5Q9HBQ8 144 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 ACP6Q9NPH0 428 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 NOCTQ9UK39 431 aaKnown RBP13.95□□□□□ -0.18
COL4A1-202ENST00000467182 BZW2Q9Y6E2 419 aaKnown RBP13.95□□□□□ -0.18
COL4A1-202ENST00000467182 A0A087X0T9 212 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 TRIM43BA6NCK2 446 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 DDX3XO00571 662 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL4A1-202ENST00000467182 CYP26A1O43174 497 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 OFD1O75665 1012 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 PARNO95453 639 aaKnown RBP13.94□□□□□ -0.18
COL4A1-202ENST00000467182 EOMESO95936 686 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 FAM228BP0C875 321 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 CHRNB2P17787 502 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 ITGB8P26012 769 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 ANXA13P27216 316 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 CYLC1P35663 651 aaPredicted RBP13.94□□□□□ -0.18
COL4A1-202ENST00000467182 SCNN1GP51170 649 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 ZNF667Q5HYK9 610 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 MICAL3Q7RTP6 2002 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 NOP9Q86U38 636 aaKnown RBP13.94□□□□□ -0.18
COL4A1-202ENST00000467182 SLC47A2Q86VL8 602 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 EPS8L1Q8TE68 723 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 DDX1Q92499 740 aaKnown RBP13.94□□□□□ -0.18
COL4A1-202ENST00000467182 SEPT8Q92599 483 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 APBB2Q92870 758 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 TRIM43Q96BQ3 446 aaPredicted RBP13.94□□□□□ -0.18
COL4A1-202ENST00000467182 RRAGDQ9NQL2 400 aaPredicted RBP13.94□□□□□ -0.18
COL4A1-202ENST00000467182 TMEM39AQ9NV64 488 aa13.94□□□□□ -0.18
COL4A1-202ENST00000467182 TRMT1Q9NXH9 659 aaKnown RBP13.94□□□□□ -0.18
COL4A1-202ENST00000467182 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.93□□□□□ -0.18
COL4A1-202ENST00000467182 KIAA0355O15063 1070 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 SPTLC1O15269 473 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 XPOTO43592 962 aaKnown RBP13.93□□□□□ -0.18
COL4A1-202ENST00000467182 CALCAP01258 141 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 CCDC175P0C221 793 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 EN2P19622 333 aaPredicted RBP13.93□□□□□ -0.18
COL4A1-202ENST00000467182 IGFBP6P24592 240 aaPredicted RBP13.93□□□□□ -0.18
COL4A1-202ENST00000467182 ARHGAP25P42331 645 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 RAP1GAPP47736 663 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 CYP27A1Q02318 531 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
COL4A1-202ENST00000467182 SLC18A3Q16572 532 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 WDR72Q3MJ13 1102 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 CLLU1OSQ5K130 101 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 SCARA5Q6ZMJ2 495 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 LIMS2Q7Z4I7 341 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 SLC20A1Q8WUM9 679 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 AGPAT1Q99943 283 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 ELAC1Q9H777 363 aaKnown RBP13.93□□□□□ -0.18
COL4A1-202ENST00000467182 SMYD3Q9H7B4 428 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 UBN1Q9NPG3 1134 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 CISHQ9NSE2 258 aa13.93□□□□□ -0.18
COL4A1-202ENST00000467182 NXF1Q9UBU9 619 aaKnown RBP13.93□□□□□ -0.18
COL4A1-202ENST00000467182 COL4A6Q14031 1691 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 RCCD1A6NED2 376 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 ZSCAN12O43309 604 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 AKR1B10O60218 316 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 ABL1P00519 1130 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 THP07101 528 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 WEE2P0C1S8 567 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 CCDC172P0C7W6 258 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 CYP11B1P15538 503 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 USP8P40818 1118 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 CDH8P55286 799 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 BMS1Q14692 1282 aaKnown RBP13.92□□□□□ -0.18
COL4A1-202ENST00000467182 RBBP8NLQ8NC74 664 aaPredicted RBP13.92□□□□□ -0.18
COL4A1-202ENST00000467182 WHAMMQ8TF30 809 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 RPS6KC1Q96S38 1066 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 PCDHB18PQ96TA0 734 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 DEF6Q9H4E7 631 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 CYP3A43Q9HB55 503 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 SLC38A7Q9NVC3 462 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 TMEM161AQ9NX61 479 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 CACNG4Q9UBN1 327 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 ADAMTS1Q9UHI8 967 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 TFR2Q9UP52 801 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 PCDHB4Q9Y5E5 795 aa13.92□□□□□ -0.18
COL4A1-202ENST00000467182 KIAA0100Q14667 2235 aaKnown RBP13.92□□□□□ -0.18
COL4A1-202ENST00000467182 TIMP1P01033 207 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 KRT5P13647 590 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 CD58P19256 250 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 RFC2P35250 354 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 FMO1Q01740 532 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 INCA1Q0VD86 236 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 GRIK3Q13003 919 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 TMEM270Q6UE05 265 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 CD300LGQ6UXG3 332 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 ZNF662Q6ZS27 426 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 NYAP1Q6ZVC0 841 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 PALB2Q86YC2 1186 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 TWNKQ96RR1 684 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 ZSWIM1Q9BR11 485 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 GDAP2Q9NXN4 497 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 HMGXB4Q9UGU5 601 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 NAGPAQ9UK23 515 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 NME7Q9Y5B8 376 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 PCDHA13Q9Y5I0 950 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms