RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 HNRNPABQ99729 332 aaKnown RBP3.97□□□□□ -1.77
CD55-207ENST00000465534 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.97□□□□□ -1.77
CD55-207ENST00000465534 BRCA2P51587 3418 aa3.96□□□□□ -1.77
CD55-207ENST00000465534 COL18A1P39060 1754 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 DHX29Q7Z478 1369 aaKnown RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 TTC21AQ8NDW8 1320 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 LRRC3CA6NJW4 275 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 MGST3O14880 152 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 IKBKBO14920 756 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 C1QL1O75973 258 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 PCDH8O95206 1070 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 RBP3P10745 1247 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 XPAP23025 273 aaPredicted RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 IGFALSP35858 605 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 ID4P47928 161 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 ZNF81P51508 661 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 SIM1P81133 766 aaPredicted RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 APBA1Q02410 837 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 ZNF169Q14929 603 aaPredicted RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 ANKS6Q68DC2 871 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 DRICH1Q6PGQ1 229 aaPredicted RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 MSL3Q8N5Y2 521 aaKnown RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 RTF1Q92541 710 aaKnown RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 ZNF778Q96MU6 729 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 GUCD1Q96NT3 240 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 ELF4Q99607 663 aaPredicted RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 SEMA4GQ9NTN9 838 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 RALYQ9UKM9 306 aaKnown RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 USP15Q9Y4E8 981 aaPredicted RBP3.96□□□□□ -1.78
CD55-207ENST00000465534 NR2E3Q9Y5X4 410 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 TRPM7Q96QT4 1865 aa3.96□□□□□ -1.78
CD55-207ENST00000465534 MYPNQ86TC9 1320 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 ANKRD17O75179 2603 aaKnown RBP3.95□□□□□ -1.78
CD55-207ENST00000465534 MARCH11A6NNE9 402 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 IRX6P78412 446 aaPredicted RBP3.95□□□□□ -1.78
CD55-207ENST00000465534 MAPK7Q13164 816 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 ARMC6Q6NXE6 501 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 EFCAB12Q6NXP0 572 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 TAS1R1Q7RTX1 841 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 C1QL2Q7Z5L3 287 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 RNF169Q8NCN4 708 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 ZNF428Q96B54 188 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 TOMM22Q9NS69 142 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 PCDHB6Q9Y5E3 794 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 FPGT-TNNI3KV9GXZ4 949 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 BRCA1P38398 1863 aaKnown RBP3.95□□□□□ -1.78
CD55-207ENST00000465534 CFAP47Q6ZTR5 3102 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 ACACBO00763 2458 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 DOPEY1Q5JWR5 2465 aa3.95□□□□□ -1.78
CD55-207ENST00000465534 ARHGEF10O15013 1369 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 ITSN1Q15811 1721 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 ST20-MTHFSA0A0A6YYL1 179 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 SMIM22K7EJ46 135 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 OPA1O60313 960 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 FOSP01100 380 aaPredicted RBP3.94□□□□□ -1.78
CD55-207ENST00000465534 CLEC2LP0C7M8 214 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 EN2P19622 333 aaPredicted RBP3.94□□□□□ -1.78
CD55-207ENST00000465534 FDXRP22570 491 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 SRSF4Q08170 494 aaKnown RBP3.94□□□□□ -1.78
CD55-207ENST00000465534 SCAPQ12770 1279 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 LRIT3Q3SXY7 679 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 FAM102AQ5T9C2 384 aaPredicted RBP3.94□□□□□ -1.78
CD55-207ENST00000465534 PIK3R6Q5UE93 754 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 PTF1AQ7RTS3 328 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 CDYL2Q8N8U2 506 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 Q8N9P0 234 aaPredicted RBP3.94□□□□□ -1.78
CD55-207ENST00000465534 FERMT2Q96AC1 680 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 Q96MF0 132 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 CDC5LQ99459 802 aaKnown RBP3.94□□□□□ -1.78
CD55-207ENST00000465534 C1QTNF7Q9BXJ2 289 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 KRTAP1-5Q9BYS1 174 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 USP18Q9UMW8 372 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 PTPN13Q12923 2485 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 SCN4AP35499 1836 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 KIF13BQ9NQT8 1826 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 BCL9O00512 1426 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 CLIP1P30622 1438 aa3.94□□□□□ -1.78
CD55-207ENST00000465534 KIF1AQ12756 1690 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 NHSQ6T4R5 1651 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 LAMA3Q16787 3333 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 EIF2AK4Q9P2K8 1649 aaKnown RBP3.93□□□□□ -1.78
CD55-207ENST00000465534 CENPFP49454 3210 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 CGB1A6NKQ9 187 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 NRP2O60462 931 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 CDKL5O76039 1030 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 NCLP19338 710 aaKnown RBP3.93□□□□□ -1.78
CD55-207ENST00000465534 FLT3P36888 993 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 RARRES1P49788 294 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 NRG3P56975 720 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 SPDYE7PQ495Y7 208 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 METRNLQ641Q3 311 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 FAM109BQ6ICB4 259 aaPredicted RBP3.93□□□□□ -1.78
CD55-207ENST00000465534 LMBR1LQ6UX01 489 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 UBE2R2Q712K3 238 aaPredicted RBP3.93□□□□□ -1.78
CD55-207ENST00000465534 GPR149Q86SP6 731 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 TCP11L2Q8N4U5 519 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 SH2D3CQ8N5H7 860 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 TFAP2CQ92754 450 aa3.93□□□□□ -1.78
CD55-207ENST00000465534 DEPDC7Q96QD5 511 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms