RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 GOLGA5Q8TBA6 731 aa17.61■□□□□ 0.41
SSNA1-204ENST00000464553 CBWD1Q9BRT8 395 aa17.61■□□□□ 0.41
SSNA1-204ENST00000464553 LRFN3Q9BTN0 628 aa17.61■□□□□ 0.41
SSNA1-204ENST00000464553 FGFBP2Q9BYJ0 223 aa17.61■□□□□ 0.41
SSNA1-204ENST00000464553 TSHZ2Q9NRE2 1034 aa17.61■□□□□ 0.41
SSNA1-204ENST00000464553 RBAKQ9NYW8 714 aaPredicted RBP17.61■□□□□ 0.41
SSNA1-204ENST00000464553 IGSF9Q9P2J2 1179 aa17.61■□□□□ 0.41
SSNA1-204ENST00000464553 AFF4Q9UHB7 1163 aaKnown RBP17.61■□□□□ 0.41
SSNA1-204ENST00000464553 SORCS3Q9UPU3 1222 aa17.61■□□□□ 0.41
SSNA1-204ENST00000464553 ARIH1Q9Y4X5 557 aaPredicted RBP17.61■□□□□ 0.41
SSNA1-204ENST00000464553 CLUHO75153 1309 aa17.61■□□□□ 0.41
SSNA1-204ENST00000464553 ODC1P11926 461 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 HOXD13P35453 343 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 TAF6P49848 677 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 ROR1Q01973 937 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 CUL4BQ13620 913 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 MYBPC2Q14324 1141 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 C12orf56Q8IXR9 622 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 SCFD1Q8WVM8 642 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 CCDC47Q96A33 483 aaKnown RBP17.6■□□□□ 0.41
SSNA1-204ENST00000464553 IKZF4Q9H2S9 585 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 C11orf16Q9NQ32 467 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 EPS15L1Q9UBC2 864 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 HSFX1Q9UBD0 423 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 CDH22Q9UJ99 828 aa17.6■□□□□ 0.41
SSNA1-204ENST00000464553 MTCL1Q9Y4B5 1905 aaKnown RBP17.59■□□□□ 0.41
SSNA1-204ENST00000464553 TGFB1I1O43294 461 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 KIF20AO95235 890 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 SMARCB1Q12824 385 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 GPR17Q13304 367 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 KNOP1Q1ED39 458 aaKnown RBP17.59■□□□□ 0.41
SSNA1-204ENST00000464553 TRIM67Q6ZTA4 783 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 LRRC52Q8N7C0 313 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 SLC7A14Q8TBB6 771 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 SENP8Q96LD8 212 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 ZNF560Q96MR9 790 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 BLZF1Q9H2G9 400 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 AVENQ9NQS1 362 aaPredicted RBP17.59■□□□□ 0.41
SSNA1-204ENST00000464553 LIMD1Q9UGP4 676 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 ITGA11Q9UKX5 1188 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 MUC3AQ02505 3323 aa17.59■□□□□ 0.41
SSNA1-204ENST00000464553 WDR27A2RRH5 827 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 PRRG1O14668 218 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 KLRC4O43908 158 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 PRPF40AO75400 957 aaKnown RBP17.58■□□□□ 0.4
SSNA1-204ENST00000464553 NDUFA8P51970 172 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 SIGLEC14Q08ET2 396 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 MTMR3Q13615 1198 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 SV2CQ496J9 727 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 OVOS1Q6IE37 1185 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 METTL23Q86XA0 190 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 GLIS3Q8NEA6 775 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 SPATA18Q8TC71 538 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 HPS3Q969F9 1004 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 SAAL1Q96ER3 474 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 PCIF1Q9H4Z3 704 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 SLC39A2Q9NP94 309 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 AGPAT3Q9NRZ7 376 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 EXOC1Q9NV70 894 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 HSPBP1Q9NZL4 362 aa17.58■□□□□ 0.4
SSNA1-204ENST00000464553 PDCD11Q14690 1871 aaKnown RBP17.58■□□□□ 0.4
SSNA1-204ENST00000464553 KPNA7A9QM74 516 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 MICAL2O94851 1124 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 LRG1P02750 347 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 LAMP2P13473 410 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 PTPN2P17706 415 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 FSHRP23945 695 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 GUCY2FP51841 1108 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 RBP5P82980 135 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 TFAMQ00059 246 aaKnown RBP17.57■□□□□ 0.4
SSNA1-204ENST00000464553 DUOXA2Q1HG44 320 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 KRBA2Q6ZNG9 492 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 EFCAB13Q8IY85 973 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 THEM5Q8N1Q8 247 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 XXYLT1Q8NBI6 393 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 BORCS6Q96GS4 357 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 MFSD14AQ96MC6 490 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 R3HCC1Q9Y3T6 440 aaKnown RBP17.57■□□□□ 0.4
SSNA1-204ENST00000464553 VWA8A3KMH1 1905 aa17.57■□□□□ 0.4
SSNA1-204ENST00000464553 GOLGA8IPA6NC78 632 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 GOLGA6L4A6NEF3 574 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 GOLGA8JA6NMD2 632 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 CYB561D2O14569 222 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 SPTLC1O15269 473 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 ZNF202O95125 648 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 CASP1P29466 404 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 GBP2P32456 591 aaPredicted RBP17.56■□□□□ 0.4
SSNA1-204ENST00000464553 TDGQ13569 410 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 SNRNP35Q16560 246 aaKnown RBP17.56■□□□□ 0.4
SSNA1-204ENST00000464553 KMT5BQ4FZB7 885 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 WDR49Q8IV35 697 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 SLC9A9Q8IVB4 645 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 FSIP1Q8NA03 581 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 LEMD2Q8NC56 503 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 ANKRD36BP1Q96IX9 119 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 KCNH6Q9H252 994 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 CYP4F11Q9HBI6 524 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 PDE11AQ9HCR9 933 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 INTS13Q9NVM9 706 aa17.56■□□□□ 0.4
SSNA1-204ENST00000464553 GDAP2Q9NXN4 497 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms