RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ST13P5Q8NFI4 369 aaPredicted RBP15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 ING5Q8WYH8 240 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 ELSPBP1Q96BH3 223 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 HVCN1Q96D96 273 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 MCRS1Q96EZ8 462 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 ZNF512Q96ME7 567 aaPredicted RBP15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 CORO1BQ9BR76 489 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 ASB7Q9H672 318 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 SEL1LQ9UBV2 794 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 CPB1P15086 417 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 CEBPBP17676 345 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 TXLNAP40222 546 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 EPHA5P54756 1037 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 LILRA4P59901 499 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 GPR17Q13304 367 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 MLF2Q15773 248 aaPredicted RBP15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 SLC44A4Q53GD3 710 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 DSTYKQ6XUX3 929 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 RNF19BQ6ZMZ0 732 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 USP49Q70CQ1 688 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 PDZD4Q76G19 769 aaPredicted RBP15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 ZNF720Q7Z2F6 126 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 FRMD5Q7Z6J6 570 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 PJA1Q8NG27 643 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 NKD2Q969F2 451 aaPredicted RBP15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 KXD1Q9BQD3 176 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 OSBPL6Q9BZF3 934 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 C2CD2Q9Y426 696 aa15.59■□□□□ 0.09
SNRNP40-203ENST00000463988 DMDP11532 3685 aa15.58■□□□□ 0.09
SNRNP40-203ENST00000463988 EP300Q09472 2414 aaPredicted RBP15.58■□□□□ 0.09
SNRNP40-203ENST00000463988 ZNF292O60281 2723 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 KANSL1LA0AUZ9 987 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 ANKRD63C9JTQ0 380 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 PIRO00625 290 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 GAP43P17677 238 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 GUCY2FP51841 1108 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 TWF1Q12792 350 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 PLD1Q13393 1074 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 SNW1Q13573 536 aaKnown RBP15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 MYBPC2Q14324 1141 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 TMEM132DQ14C87 1099 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 ZC2HC1CQ53FD0 456 aaPredicted RBP15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 SPECC1Q5M775 1068 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 RRAGBQ5VZM2 374 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 C9orf57Q5W0N0 161 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 ADALQ6DHV7 355 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 OVOS1Q6IE37 1185 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 JADE1Q6IE81 842 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 POTEHQ6S545 545 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 SV2BQ7L1I2 683 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 ASCL5Q7RTU5 278 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 STRA6Q9BX79 667 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 SEMA4AQ9H3S1 761 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 CEP72Q9P209 647 aa15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 AGO2Q9UKV8 859 aaKnown RBP15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 TIMM13Q9Y5L4 95 aaPredicted RBP15.58■□□□□ 0.08
SNRNP40-203ENST00000463988 ANO9A1A5B4 782 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 PPP1R37O75864 691 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 DCNP07585 359 aaKnown RBP15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 ODC1P11926 461 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 CCR2P41597 374 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 SLC39A14Q15043 492 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 POSTNQ15063 836 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 FAM78AQ5JUQ0 283 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 TANGO2Q6ICL3 276 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 CCDC73Q6ZRK6 1079 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 DYMQ7RTS9 669 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 SFR1Q86XK3 245 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 TMEM130Q8N3G9 435 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 DNASE1L2Q92874 299 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 TCEAL4Q96EI5 215 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 SENP8Q96LD8 212 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 NELL2Q99435 816 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 FOXQ1Q9C009 403 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 GPR88Q9GZN0 384 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 ZSCAN16Q9H4T2 348 aaPredicted RBP15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 ZFP14Q9HCL3 533 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 ASAH2Q9NR71 780 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 HSFX1Q9UBD0 423 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 YIPF1Q9Y548 306 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 VPS13AQ96RL7 3174 aa15.57■□□□□ 0.08
SNRNP40-203ENST00000463988 F5P12259 2224 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 CACNA1IQ9P0X4 2223 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 CFAP54Q96N23 3096 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 MYMKA6NI61 221 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 PPEF2O14830 753 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 MOSPD3O75425 235 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 VNN2O95498 520 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 CYP11A1P05108 521 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 NFICP08651 508 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 FCARP24071 287 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 MAGEA9P43362 315 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 ACOT2P49753 483 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 CENPPQ6IPU0 288 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 FAM173BQ6P4H8 233 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 NT5DC4Q86YG4 428 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 C1orf210Q8IVY1 113 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 SMARCD2Q92925 531 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 DNAJC19Q96DA6 116 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms