RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 NTHL1P78549 312 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 STK4Q13043 487 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 TMEM31Q5JXX7 168 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 LIN9Q5TKA1 542 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 CYP26C1Q6V0L0 522 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 STXBP4Q6ZWJ1 553 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 CBWD2Q8IUF1 395 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 FSIP1Q8NA03 581 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 APPL2Q8NEU8 664 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 EDAQ92838 391 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 SMOC2Q9H3U7 446 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 PIDD1Q9HB75 910 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 PDE11AQ9HCR9 933 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
XRN1-203ENST00000463916 A0A1W2PQ27 194 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 A0A1W2PQ64 194 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 A0A1W2PQD8 194 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 H7C4K7 107 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 CLIC2O15247 247 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 SEC24AO95486 1093 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 TFAMQ00059 246 aaKnown RBP14.03□□□□□ -0.16
XRN1-203ENST00000463916 KMT5BQ4FZB7 885 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 PPM1LQ5SGD2 360 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 DSTYKQ6XUX3 929 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 GRASPQ7Z6J2 395 aaPredicted RBP14.03□□□□□ -0.16
XRN1-203ENST00000463916 ZDHHC14Q8IZN3 488 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 GPD1LQ8N335 351 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 TDRD5Q8NAT2 981 aaKnown RBP14.03□□□□□ -0.16
XRN1-203ENST00000463916 KIAA0895Q8NCT3 520 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 CXorf38Q8TB03 319 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 BORCS6Q96GS4 357 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 SENP8Q96LD8 212 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 AGPAT3Q9NRZ7 376 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 HCFC1R1Q9NWW0 138 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 HSPBP1Q9NZL4 362 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.03□□□□□ -0.16
XRN1-203ENST00000463916 TECTAO75443 2155 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 CLUHO75153 1309 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 PTPRJQ12913 1337 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 OR4Q2P0C623 313 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 ATF2P15336 505 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 NUCB2P80303 420 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 ZXDAP98168 799 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 YWHAHQ04917 246 aaPredicted RBP14.03□□□□□ -0.16
XRN1-203ENST00000463916 PTPN21Q16825 1174 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 BMT2Q1RMZ1 405 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 ZNF280DQ6N043 979 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 C1orf127Q8N9H9 656 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 MYADMQ96S97 322 aa14.03□□□□□ -0.16
XRN1-203ENST00000463916 VNN2O95498 520 aa14.02□□□□□ -0.16
XRN1-203ENST00000463916 HNRNPA1P09651 372 aaKnown RBP eCLIP14.02□□□□□ -0.16
XRN1-203ENST00000463916 HOXA9P31269 272 aa14.02□□□□□ -0.16
XRN1-203ENST00000463916 UVSSAQ2YD98 709 aa14.02□□□□□ -0.16
XRN1-203ENST00000463916 LMBRD2Q68DH5 695 aaPredicted RBP14.02□□□□□ -0.16
XRN1-203ENST00000463916 OTOP3Q7RTS5 596 aa14.02□□□□□ -0.16
XRN1-203ENST00000463916 RDH13Q8NBN7 331 aa14.02□□□□□ -0.16
XRN1-203ENST00000463916 USP25Q9UHP3 1055 aa14.02□□□□□ -0.16
XRN1-203ENST00000463916 POLIQ9UNA4 740 aa14.02□□□□□ -0.16
XRN1-203ENST00000463916 ZNF202O95125 648 aa14.02□□□□□ -0.17
XRN1-203ENST00000463916 CDR1P51861 262 aa14.02□□□□□ -0.17
XRN1-203ENST00000463916 KNOP1Q1ED39 458 aaKnown RBP14.02□□□□□ -0.17
XRN1-203ENST00000463916 RNF19BQ6ZMZ0 732 aa14.02□□□□□ -0.17
XRN1-203ENST00000463916 NT5DC4Q86YG4 428 aa14.02□□□□□ -0.17
XRN1-203ENST00000463916 ST13P5Q8NFI4 369 aaPredicted RBP14.02□□□□□ -0.17
XRN1-203ENST00000463916 TMEM209Q96SK2 561 aa14.02□□□□□ -0.17
XRN1-203ENST00000463916 DNMT3BQ9UBC3 853 aaKnown RBP14.02□□□□□ -0.17
XRN1-203ENST00000463916 NOTCH4Q99466 2003 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 DOCK8Q8NF50 2099 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 ZNF233A6NK53 670 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 ITGB3P05106 788 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 POLR2BP30876 1174 aaKnown RBP14.01□□□□□ -0.17
XRN1-203ENST00000463916 CYP2J2P51589 502 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 ADCY1Q08828 1119 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 OVOS1Q6IE37 1185 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 KRBA2Q6ZNG9 492 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 TRIM67Q6ZTA4 783 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 HFE2Q6ZVN8 426 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 USP37Q86T82 979 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 TCEAL8Q8IYN2 117 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 OR5B17Q8NGF7 314 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 ACSF2Q96CM8 615 aaPredicted RBP14.01□□□□□ -0.17
XRN1-203ENST00000463916 MTMR12Q9C0I1 747 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 CRISPLD1Q9H336 500 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 CYP4F11Q9HBI6 524 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 SIX4Q9UIU6 781 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 AGAP1Q9UPQ3 857 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 UBE4BO95155 1302 aa14.01□□□□□ -0.17
XRN1-203ENST00000463916 ARHGEF37A1IGU5 675 aa14□□□□□ -0.17
XRN1-203ENST00000463916 PRR33A8MZF0 331 aa14□□□□□ -0.17
XRN1-203ENST00000463916 CYB561D2O14569 222 aa14□□□□□ -0.17
XRN1-203ENST00000463916 KIAA0391O15091 583 aaKnown RBP14□□□□□ -0.17
XRN1-203ENST00000463916 RPN1P04843 607 aaKnown RBP14□□□□□ -0.17
XRN1-203ENST00000463916 ODC1P11926 461 aa14□□□□□ -0.17
XRN1-203ENST00000463916 TYMPP19971 482 aa14□□□□□ -0.17
XRN1-203ENST00000463916 COL9A1P20849 921 aa14□□□□□ -0.17
XRN1-203ENST00000463916 GBP2P32456 591 aaPredicted RBP14□□□□□ -0.17
XRN1-203ENST00000463916 TAF6P49848 677 aa14□□□□□ -0.17
XRN1-203ENST00000463916 DPYDQ12882 1025 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms