RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 LRMPQ12912 555 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 RAPGEF1Q13905 1077 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 SFMBT2Q5VUG0 894 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 TDRD10Q5VZ19 366 aaKnown RBP16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 JADE1Q6IE81 842 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 PDXDC1Q6P996 788 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 TRAPPC11Q7Z392 1133 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 OR5B17Q8NGF7 314 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 NXF3Q9H4D5 531 aaKnown RBP16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 NSUN3Q9H649 340 aaKnown RBP16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 SIX2Q9NPC8 291 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 FAM105AQ9NUU6 356 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 DNAJC12Q9UKB3 198 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 PLAGL2Q9UPG8 496 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 C2CD2Q9Y426 696 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 LRRC53A6NM62 1247 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 GRM6O15303 877 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 NCK2O43639 380 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 RECQL4O94761 1208 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 CCDC172P0C7W6 258 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 MSNP26038 577 aaKnown RBP16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 KCNQ1P51787 676 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 PTPRJQ12913 1337 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 NCOA4Q13772 614 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 SGSM1Q2NKQ1 1148 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 CYP26C1Q6V0L0 522 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 ENOSF1Q7L5Y1 443 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 TMTC1Q8IUR5 882 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 LMO3Q8TAP4 145 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 SYN2Q92777 582 aaPredicted RBP16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 PGBD4Q96DM1 585 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 KIF12Q96FN5 646 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 SNX27Q96L92 541 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 TRAIPQ9BWF2 469 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 STK33Q9BYT3 514 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 MTMR12Q9C0I1 747 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 KCNF1Q9H3M0 494 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 UBE2ZQ9H832 354 aaPredicted RBP16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 UBE2TQ9NPD8 197 aaPredicted RBP16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 ZKSCAN5Q9Y2L8 839 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 HES2Q9Y543 173 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
TMEM39A-203ENST00000461654 NLRC5Q86WI3 1866 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 A0A0U1RQF3 1178 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 RNF225M0QZC1 329 aaPredicted RBP16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 ARHGAP6O43182 974 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 EOMESO95936 686 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 NFICP08651 508 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 AKAP5P24588 427 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 STAT1P42224 750 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 APBA1Q02410 837 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 CAMK1Q14012 370 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 ASIC2Q16515 512 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 LEXMQ3ZCV2 418 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 TCEAL5Q5H9L2 206 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 IQCEQ6IPM2 695 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 ZSCAN30Q86W11 494 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 EFCAB13Q8IY85 973 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 PPM1KQ8N3J5 372 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 SMG8Q8ND04 991 aaKnown RBP16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 BEST2Q8NFU1 509 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 SPPL3Q8TCT6 385 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 BAP1Q92560 729 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 TAF4BQ92750 862 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 SEMA4DQ92854 862 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 UHRF1Q96T88 793 aaPredicted RBP16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 VCANP13611 3396 aa16.31■□□□□ 0.2
TMEM39A-203ENST00000461654 HOXA2O43364 376 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 KRT19P08727 400 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 FERP16591 822 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 HNRNPH3P31942 346 aaKnown RBP16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 GATMP50440 423 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 CCZ1BP86790 482 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 CCZ1P86791 482 aaPredicted RBP16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 PHLDB3Q6NSJ2 640 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 ECHDC2Q86YB7 292 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 PABPC5Q96DU9 382 aaKnown RBP16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 RPS6KC1Q96S38 1066 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 AAASQ9NRG9 546 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 DPP3Q9NY33 737 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 CNTN3Q9P232 1028 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 ITGA11Q9UKX5 1188 aa16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 UBQLN1Q9UMX0 589 aaKnown RBP16.3■□□□□ 0.2
TMEM39A-203ENST00000461654 CUL9Q8IWT3 2517 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 ZNF623O75123 536 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 VNN1O95497 513 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 ITGB1P05556 798 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 KCNE1P15382 129 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 TBXAS1P24557 533 aaPredicted RBP16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 ATICP31939 592 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 RBP5P82980 135 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 CDK17Q00537 523 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 GCNT1Q02742 428 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 UBE3AQ05086 875 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 DRAP1Q14919 205 aaPredicted RBP16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 ARHGAP44Q17R89 818 aa16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 PUS10Q3MIT2 529 aaKnown RBP16.29■□□□□ 0.2
TMEM39A-203ENST00000461654 PAN2Q504Q3 1202 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms