RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 ZBTB41Q5SVQ8 909 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 CCDC149Q6ZUS6 474 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 C11orf57Q6ZUT1 292 aaPredicted RBP16.91■□□□□ 0.3
SDF4-204ENST00000459994 NELFCDQ8IXH7 590 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 SYCP3Q8IZU3 236 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 GOLGA5Q8TBA6 731 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 NELFBQ8WX92 580 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 SMG7Q92540 1137 aaKnown RBP16.91■□□□□ 0.3
SDF4-204ENST00000459994 MYADMQ96S97 322 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 BPIFA3Q9BQP9 254 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 CCDC94Q9BW85 323 aaPredicted RBP16.91■□□□□ 0.3
SDF4-204ENST00000459994 DNAJC25Q9H1X3 360 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 IKZF4Q9H2S9 585 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 TSPY26PQ9H489 355 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.91■□□□□ 0.3
SDF4-204ENST00000459994 RWDD2AQ9UIY3 292 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 FBXW11Q9UKB1 542 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 SORCS3Q9UPU3 1222 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 TRAF3IP3Q9Y228 551 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 SCN1AP35498 2009 aa16.91■□□□□ 0.3
SDF4-204ENST00000459994 BICDL2A1A5D9 508 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 TGFB1I1O43294 461 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 B3GAT3O94766 335 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 PAPLNO95428 1278 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 FGFR3P22607 806 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 LRRC63Q05C16 580 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 NOLC1Q14978 699 aaKnown RBP eCLIP16.9■□□□□ 0.3
SDF4-204ENST00000459994 ZCWPW2Q504Y3 356 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 KLHL10Q6JEL2 608 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 HS2ST1Q7LGA3 356 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 GPR65Q8IYL9 337 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 PRSS33Q8NF86 280 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 TMEM174Q8WUU8 243 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 RSAD2Q8WXG1 361 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 DDX27Q96GQ7 796 aaKnown RBP16.9■□□□□ 0.3
SDF4-204ENST00000459994 ACAP3Q96P50 834 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 TCHPQ9BT92 498 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 WDR6Q9NNW5 1121 aaKnown RBP16.9■□□□□ 0.3
SDF4-204ENST00000459994 CNTN3Q9P232 1028 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 USTQ9Y2C2 406 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 ARIH1Q9Y4X5 557 aaPredicted RBP16.9■□□□□ 0.3
SDF4-204ENST00000459994 STYXL1Q9Y6J8 313 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 CLUHO75153 1309 aa16.9■□□□□ 0.3
SDF4-204ENST00000459994 HNRNPDLO14979 420 aaKnown RBP16.89■□□□□ 0.29
SDF4-204ENST00000459994 CALUO43852 315 aaPredicted RBP16.89■□□□□ 0.29
SDF4-204ENST00000459994 TOM1L1O75674 476 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 CXCL8P10145 99 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 YARSP54577 528 aaKnown RBP16.89■□□□□ 0.29
SDF4-204ENST00000459994 NTHL1P78549 312 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 MYBPC2Q14324 1141 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 NFIL3Q16649 462 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 EDRF1Q3B7T1 1238 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 SLC39A4Q6P5W5 647 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 DCLRE1AQ6PJP8 1040 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.89■□□□□ 0.29
SDF4-204ENST00000459994 C12orf56Q8IXR9 622 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 FBXL6Q8N531 539 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 TSG101Q99816 390 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 TUBGCP4Q9UGJ1 667 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 CTNND2Q9UQB3 1225 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 ZDBF2Q9HCK1 2354 aa16.89■□□□□ 0.29
SDF4-204ENST00000459994 TISP43B9A030 160 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 ANKRD63C9JTQ0 380 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 PODXLO00592 558 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 NARSO43776 548 aaKnown RBP16.88■□□□□ 0.29
SDF4-204ENST00000459994 FAM189A1O60320 539 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 ZMYND10O75800 440 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 KCNE1P15382 129 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 OR1D2P34982 312 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 ZNF165P49910 485 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 LIG4P49917 911 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 MCL1Q07820 350 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 MTMR3Q13615 1198 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 ANKRD40Q6AI12 368 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 SLFN12LQ6IEE8 588 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 TTI2Q6NXR4 508 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 SLC9A9Q8IVB4 645 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 ENOX1Q8TC92 643 aaKnown RBP16.88■□□□□ 0.29
SDF4-204ENST00000459994 HDAC7Q8WUI4 952 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 BICD1Q96G01 975 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 MFSD14AQ96MC6 490 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 MED15Q96RN5 788 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 PHOX2BQ99453 314 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 PRKD2Q9BZL6 878 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 PLEKHA4Q9H4M7 779 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 AGPAT3Q9NRZ7 376 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 TOPORSQ9NS56 1045 aaPredicted RBP16.88■□□□□ 0.29
SDF4-204ENST00000459994 MTRRQ9UBK8 725 aa16.88■□□□□ 0.29
SDF4-204ENST00000459994 CCL16O15467 120 aa16.87■□□□□ 0.29
SDF4-204ENST00000459994 GARTP22102 1010 aa16.87■□□□□ 0.29
SDF4-204ENST00000459994 RPL13P26373 211 aaKnown RBP16.87■□□□□ 0.29
SDF4-204ENST00000459994 GBP2P32456 591 aaPredicted RBP16.87■□□□□ 0.29
SDF4-204ENST00000459994 GUCY2FP51841 1108 aa16.87■□□□□ 0.29
SDF4-204ENST00000459994 PMS1P54277 932 aaKnown RBP16.87■□□□□ 0.29
SDF4-204ENST00000459994 STX17P56962 302 aa16.87■□□□□ 0.29
SDF4-204ENST00000459994 GET4Q7L5D6 327 aaPredicted RBP16.87■□□□□ 0.29
SDF4-204ENST00000459994 OTOP3Q7RTS5 596 aa16.87■□□□□ 0.29
SDF4-204ENST00000459994 APBB1IPQ7Z5R6 666 aaPredicted RBP16.87■□□□□ 0.29
SDF4-204ENST00000459994 ZC3H3Q8IXZ2 948 aaKnown RBP16.87■□□□□ 0.29
SDF4-204ENST00000459994 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms