RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PEX5P50542 639 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 C1QTNF8P60827 252 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 GRB10Q13322 594 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 COG2Q14746 738 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 RBBP5Q15291 538 aaKnown RBP5.91□□□□□ -1.46
VPS41-209ENST00000457055 ASIC2Q16515 512 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 CLPPQ16740 277 aaPredicted RBP5.91□□□□□ -1.46
VPS41-209ENST00000457055 SLC5A9Q2M3M2 681 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 PROSER3Q2NL68 480 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 ATP13A4Q4VNC1 1196 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 AKNAD1Q5T1N1 836 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 KAZNQ674X7 775 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 KDELC2Q7Z4H8 507 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 ZER1Q7Z7L7 766 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 SLC9B2Q86UD5 537 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 VSIG1Q86XK7 387 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 EPHX4Q8IUS5 362 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 NIM1KQ8IY84 436 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 NRSN1Q8IZ57 195 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 SLC7A5P1Q8MH63 180 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 LINC00469Q8N7U9 141 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 MIPOL1Q8TD10 442 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 THAP3Q8WTV1 239 aaPredicted RBP5.91□□□□□ -1.46
VPS41-209ENST00000457055 STON2Q8WXE9 905 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 RABGGTAQ92696 567 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 TTC17Q96AE7 1141 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 ZBTB8AQ96BR9 441 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 GCC1Q96CN9 775 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 NRBF2Q96F24 287 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 RADILQ96JH8 1075 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 SPATA17Q96L03 361 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 GPR20Q99678 358 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 LSM14BQ9BX40 385 aaKnown RBP5.91□□□□□ -1.46
VPS41-209ENST00000457055 SEMA4AQ9H3S1 761 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 VCPKMTQ9H867 229 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 BRD9Q9H8M2 597 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 ZNF624Q9P2J8 865 aaPredicted RBP5.91□□□□□ -1.46
VPS41-209ENST00000457055 RCAN3Q9UKA8 241 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 MSRB2Q9Y3D2 182 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 NINLQ9Y2I6 1382 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 UBR1Q8IWV7 1749 aa5.91□□□□□ -1.46
VPS41-209ENST00000457055 hCG_1642624A0A1W2PR95 340 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 CCDC69A6NI79 296 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 A8MVJ9 347 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 MASP2O00187 686 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 PMM2O15305 246 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 PDPK1O15530 556 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 NPHS1O60500 1241 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 TLR5O60602 858 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 PDE8AO60658 829 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 PPP1R11O60927 126 aaPredicted RBP5.9□□□□□ -1.46
VPS41-209ENST00000457055 DNTTP04053 509 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 S100A6P06703 90 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 PYGLP06737 847 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 RHOXF2BP0C7M4 288 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 PCP11498 1178 aaKnown RBP5.9□□□□□ -1.46
VPS41-209ENST00000457055 INSRRP14616 1297 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 ATP5DP30049 168 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 HOXC12P31275 282 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 ELF1P32519 619 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 STAT1P42224 750 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 PSMC4P43686 418 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 PHKA1P46020 1223 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 SOX9P48436 509 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 GIPRP48546 466 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 CTCFP49711 727 aaPredicted RBP5.9□□□□□ -1.46
VPS41-209ENST00000457055 TUBA1BP68363 451 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 UBXN1Q04323 297 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 ITIH3Q06033 890 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 MTMR1Q13613 665 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 GEN1Q17RS7 908 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 C15orf59Q2T9L4 293 aaPredicted RBP5.9□□□□□ -1.46
VPS41-209ENST00000457055 WSCD2Q2TBF2 565 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 C5orf22Q49AR2 442 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 MINDY4Q4G0A6 757 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 MFSD6Q6ZSS7 791 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 TTLL7Q6ZT98 887 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 TUBA1AQ71U36 451 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 RSPH3Q86UC2 560 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 NLRP10Q86W26 655 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 FAM114A1Q8IWE2 563 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 ARHGEF39Q8N4T4 335 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 NAT8LQ8N9F0 302 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 ZNF540Q8NDQ6 660 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 TRIM58Q8NG06 486 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 OR6P1Q8NGX9 317 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 CCDC26Q8TAB7 109 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 FBXO30Q8TB52 745 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 CCHCR1Q8TD31 782 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 KLHL6Q8WZ60 621 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 DDX17Q92841 729 aaKnown RBP5.9□□□□□ -1.46
VPS41-209ENST00000457055 DDX11Q96FC9 970 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 JAKMIP1Q96N16 626 aaKnown RBP5.9□□□□□ -1.46
VPS41-209ENST00000457055 RMDN3Q96TC7 470 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 SEC62Q99442 399 aaKnown RBP5.9□□□□□ -1.46
VPS41-209ENST00000457055 MPHOSPH8Q99549 860 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 MYD88Q99836 296 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 RHOXF2Q9BQY4 288 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 DESI2Q9BSY9 194 aa5.9□□□□□ -1.46
VPS41-209ENST00000457055 FSD1Q9BTV5 496 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms