RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 ARRDC1-AS1Q9H2J1 176 aa25.43■■□□□ 1.66
PTPRA-208ENST00000455631 MAFFQ9ULX9 164 aa25.43■■□□□ 1.66
PTPRA-208ENST00000455631 YIPF1Q9Y548 306 aa25.43■■□□□ 1.66
PTPRA-208ENST00000455631 EPB41L2O43491 1005 aaKnown RBP25.42■■□□□ 1.66
PTPRA-208ENST00000455631 FDPSP14324 419 aaKnown RBP25.42■■□□□ 1.66
PTPRA-208ENST00000455631 RPL9P32969 192 aaKnown RBP25.42■■□□□ 1.66
PTPRA-208ENST00000455631 MCM7P33993 719 aa25.42■■□□□ 1.66
PTPRA-208ENST00000455631 FCHO2Q0JRZ9 810 aa25.42■■□□□ 1.66
PTPRA-208ENST00000455631 WDR5BQ86VZ2 330 aa25.42■■□□□ 1.66
PTPRA-208ENST00000455631 GPIHBP1Q8IV16 184 aa25.42■■□□□ 1.66
PTPRA-208ENST00000455631 DIS3L2Q8IYB7 885 aaKnown RBP25.42■■□□□ 1.66
PTPRA-208ENST00000455631 APPL2Q8NEU8 664 aa25.42■■□□□ 1.66
PTPRA-208ENST00000455631 DDX12PQ92771 950 aa25.42■■□□□ 1.66
PTPRA-208ENST00000455631 KIFAP3Q92845 792 aa25.42■■□□□ 1.66
PTPRA-208ENST00000455631 PHLPP2Q6ZVD8 1323 aa25.41■■□□□ 1.66
PTPRA-208ENST00000455631 CHD6Q8TD26 2715 aa25.41■■□□□ 1.66
PTPRA-208ENST00000455631 MYBPHLA2RUH7 354 aa25.41■■□□□ 1.66
PTPRA-208ENST00000455631 RPA1P27694 616 aa25.41■■□□□ 1.66
PTPRA-208ENST00000455631 SHC2P98077 582 aa25.41■■□□□ 1.66
PTPRA-208ENST00000455631 PON2Q15165 354 aa25.41■■□□□ 1.66
PTPRA-208ENST00000455631 RALGPS2Q86X27 583 aaPredicted RBP25.41■■□□□ 1.66
PTPRA-208ENST00000455631 TBC1D32Q96NH3 1257 aa25.41■■□□□ 1.66
PTPRA-208ENST00000455631 RXFP3Q9NSD7 469 aa25.41■■□□□ 1.66
PTPRA-208ENST00000455631 KCNE1P15382 129 aa25.4■■□□□ 1.66
PTPRA-208ENST00000455631 STXBP5Q5T5C0 1151 aa25.4■■□□□ 1.66
PTPRA-208ENST00000455631 ZFYVE19Q96K21 471 aa25.4■■□□□ 1.66
PTPRA-208ENST00000455631 ACAP3Q96P50 834 aa25.4■■□□□ 1.66
PTPRA-208ENST00000455631 PGLYRP2Q96PD5 576 aa25.4■■□□□ 1.66
PTPRA-208ENST00000455631 ACO2Q99798 780 aaKnown RBP25.4■■□□□ 1.66
PTPRA-208ENST00000455631 GTSE1Q9NYZ3 720 aa25.4■■□□□ 1.66
PTPRA-208ENST00000455631 CNTN3Q9P232 1028 aa25.4■■□□□ 1.66
PTPRA-208ENST00000455631 NUP210Q8TEM1 1887 aaPredicted RBP25.39■■□□□ 1.66
PTPRA-208ENST00000455631 SPAG17Q6Q759 2223 aa25.39■■□□□ 1.66
PTPRA-208ENST00000455631 CCDC169A6NNP5 214 aa25.39■■□□□ 1.66
PTPRA-208ENST00000455631 HARSP12081 509 aaKnown RBP25.39■■□□□ 1.66
PTPRA-208ENST00000455631 HOXA6P31267 233 aa25.39■■□□□ 1.66
PTPRA-208ENST00000455631 PLD1Q13393 1074 aa25.39■■□□□ 1.66
PTPRA-208ENST00000455631 TMC8Q8IU68 726 aa25.39■■□□□ 1.66
PTPRA-208ENST00000455631 ARID3BQ8IVW6 561 aaPredicted RBP25.39■■□□□ 1.66
PTPRA-208ENST00000455631 MRPL4Q9BYD3 311 aaKnown RBP25.39■■□□□ 1.66
PTPRA-208ENST00000455631 BHMT2Q9H2M3 363 aa25.39■■□□□ 1.66
PTPRA-208ENST00000455631 PTPRHQ9HD43 1115 aa25.39■■□□□ 1.66
PTPRA-208ENST00000455631 PCDHB8Q9UN66 801 aa25.39■■□□□ 1.66
PTPRA-208ENST00000455631 KIF26AQ9ULI4 1882 aaPredicted RBP25.38■■□□□ 1.65
PTPRA-208ENST00000455631 DPYSL4O14531 572 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 TM4SF5O14894 197 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 ZNF806P0C7X5 589 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 MARCKSP29966 332 aaPredicted RBP25.38■■□□□ 1.65
PTPRA-208ENST00000455631 CCINQ13939 588 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 TRIM29Q14134 588 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 STPG1Q5TH74 334 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 HAUS6Q7Z4H7 955 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 TCHPQ9BT92 498 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 TARS2Q9BW92 718 aaKnown RBP25.38■■□□□ 1.65
PTPRA-208ENST00000455631 LRRC3Q9BY71 257 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 SDK1Q7Z5N4 2213 aa25.38■■□□□ 1.65
PTPRA-208ENST00000455631 RPP40O75818 363 aaKnown RBP25.37■■□□□ 1.65
PTPRA-208ENST00000455631 EPN2O95208 641 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 OR4Q2P0C623 313 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 MCF2P10911 925 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 PXNP49023 591 aaPredicted RBP25.37■■□□□ 1.65
PTPRA-208ENST00000455631 EPHB3P54753 998 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 PEX3P56589 373 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 YWHAHQ04917 246 aaPredicted RBP25.37■■□□□ 1.65
PTPRA-208ENST00000455631 ARHGAP29Q52LW3 1261 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 HAUS3Q68CZ6 603 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 NECAB1Q8N987 351 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 BEST2Q8NFU1 509 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 GAB3Q8WWW8 586 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 LOXL4Q96JB6 756 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 DNAJC25Q9H1X3 360 aa25.37■■□□□ 1.65
PTPRA-208ENST00000455631 EXTL3O43909 919 aa25.36■■□□□ 1.65
PTPRA-208ENST00000455631 OR52Z1P0C646 297 aa25.36■■□□□ 1.65
PTPRA-208ENST00000455631 CCDC192P0DO97 292 aa25.36■■□□□ 1.65
PTPRA-208ENST00000455631 CACNA2D4Q7Z3S7 1137 aa25.36■■□□□ 1.65
PTPRA-208ENST00000455631 KBTBD6Q86V97 674 aa25.36■■□□□ 1.65
PTPRA-208ENST00000455631 SYNPOQ8N3V7 929 aa25.36■■□□□ 1.65
PTPRA-208ENST00000455631 LRRC3BQ96PB8 259 aa25.36■■□□□ 1.65
PTPRA-208ENST00000455631 TUBGCP4Q9UGJ1 667 aa25.36■■□□□ 1.65
PTPRA-208ENST00000455631 MEFVO15553 781 aaPredicted RBP25.35■■□□□ 1.65
PTPRA-208ENST00000455631 VNN2O95498 520 aa25.35■■□□□ 1.65
PTPRA-208ENST00000455631 CCT6AP40227 531 aaKnown RBP25.35■■□□□ 1.65
PTPRA-208ENST00000455631 NPTX2P47972 431 aa25.35■■□□□ 1.65
PTPRA-208ENST00000455631 DUSP4Q13115 394 aa25.35■■□□□ 1.65
PTPRA-208ENST00000455631 DMP1Q13316 513 aaPredicted RBP25.35■■□□□ 1.65
PTPRA-208ENST00000455631 MPZL3Q6UWV2 235 aa25.35■■□□□ 1.65
PTPRA-208ENST00000455631 CRISPLD1Q9H336 500 aa25.35■■□□□ 1.65
PTPRA-208ENST00000455631 SMOC1Q9H4F8 434 aa25.35■■□□□ 1.65
PTPRA-208ENST00000455631 TIMM13Q9Y5L4 95 aaPredicted RBP25.35■■□□□ 1.65
PTPRA-208ENST00000455631 KCNK5O95279 499 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 MUTP22033 750 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 RAP1GAPP47736 663 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 ALDH1A3P47895 512 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 TNK2Q07912 1038 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 ECM1Q16610 540 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 TAS1R3Q7RTX0 852 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 MKNK1Q9BUB5 465 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 ATXN3LQ9H3M9 355 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 TMEM134Q9H6X4 195 aa25.34■■□□□ 1.65
PTPRA-208ENST00000455631 ABLIM1O14639 778 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms