RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 LILRA6Q6PI73 481 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 BTNL9Q6UXG8 535 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 TOGARAM2Q6ZUX3 1019 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 KCTD1Q719H9 257 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 VN1R5Q7Z5H4 357 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 LRRC43Q8N309 656 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 TMEM87AQ8NBN3 555 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 ITFG1Q8TB96 612 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 ZBTB10Q96DT7 871 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 MRRFQ96E11 262 aaKnown RBP6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 MED8Q96G25 268 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 CAMK1GQ96NX5 476 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 PHF20Q9BVI0 1012 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 C1orf112Q9NSG2 853 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 TCP11L1Q9NUJ3 509 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 MBD1Q9UIS9 605 aaPredicted RBP6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 MRVI1Q9Y6F6 885 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 FN1P02751 2386 aaKnown RBP6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 MUC22E2RYF6 1773 aaPredicted RBP6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 COL4A2P08572 1712 aa6.11□□□□□ -1.43
SBDSP1-204ENST00000453858 KAT6AQ92794 2004 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 ZBED9Q6R2W3 1325 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 FANCIQ9NVI1 1328 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 BAZ2AQ9UIF9 1905 aaKnown RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 MYH4Q9Y623 1939 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 MSTNO14793 375 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 B4GALT3O60512 393 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 TTLL1O95922 423 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 EFEMP2O95967 443 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 AFPP02771 609 aaKnown RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 MYBP10242 640 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 ESRRAP11474 423 aaPredicted RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 IBSPP21815 317 aaPredicted RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 CA8P35219 290 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 SLC1A4P43007 532 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 METAP2P50579 478 aaKnown RBP eCLIP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 RARSP54136 660 aaKnown RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 MLLT6P55198 1093 aaPredicted RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 SNRPNP63162 240 aaKnown RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 NTHL1P78549 312 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 HNRNPUQ00839 825 aaKnown RBP eCLIP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 PCDH1Q08174 1060 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 G3BP1Q13283 466 aaKnown RBP eCLIP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 HNRNPDQ14103 355 aaKnown RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 TAF1BQ53T94 588 aaPredicted RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 TANGO2Q6ICL3 276 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 C8orf86Q6ZUL3 223 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 SV2BQ7L1I2 683 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 RSPH3Q86UC2 560 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 DMRTC2Q8IXT2 367 aaPredicted RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 C3orf58Q8NDZ4 430 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 SYTL5Q8TDW5 730 aaPredicted RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 NSUN6Q8TEA1 469 aaKnown RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 PHKBQ93100 1093 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 TMEM169Q96HH4 297 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 EMILIN2Q9BXX0 1053 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 CELF4Q9BZC1 486 aaKnown RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 ZDHHC7Q9NXF8 308 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 NOC2LQ9Y3T9 749 aaKnown RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 SAMM50Q9Y512 469 aa6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 KIF26AQ9ULI4 1882 aaPredicted RBP6.1□□□□□ -1.43
SBDSP1-204ENST00000453858 WDR81Q562E7 1941 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 MTCL1Q9Y4B5 1905 aaKnown RBP6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 PKD1L1Q8TDX9 2849 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 FRMPD4Q14CM0 1322 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 METTL12A8MUP2 240 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 ARNTLO00327 626 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 TEX28O15482 410 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 RHOBTB1O94844 696 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 B3GALT4O96024 378 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 ITGB2P05107 769 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 GALTP07902 379 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 SPATA31D3P0C874 917 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 CCDC192P0DO97 292 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 TGFB3P10600 412 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 PDE6AP16499 860 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 UBA1P22314 1058 aaKnown RBP6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 TLE3Q04726 772 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 LMAN2Q12907 356 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 CCDC158Q5M9N0 1113 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 TTC39AQ5SRH9 613 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 HP1BP3Q5SSJ5 553 aaPredicted RBP6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 TTBK2Q6IQ55 1244 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 SPATA31D4Q6ZUB0 917 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 GLRX5Q86SX6 157 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 TMEM40Q8WWA1 233 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 TRIM11Q96F44 468 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 MAF1Q9H063 256 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 RXFP1Q9HBX9 757 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 METTL5Q9NRN9 209 aaKnown RBP6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 ST3GAL5Q9UNP4 418 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 TRPV2Q9Y5S1 764 aa6.09□□□□□ -1.43
SBDSP1-204ENST00000453858 ZMYM6O95789 1325 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 A0A0A0MRY4 1105 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 LINC01387J3KSC0 135 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 CBFA2T3O75081 653 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 ENGP17813 658 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 EPHA1P21709 976 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 FCARP24071 287 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms