RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 TIAM2Q8IVF5 1701 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 LINGO3P0C6S8 592 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 CLK2P49760 499 aaKnown RBP14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 ALDH18A1P54886 795 aaKnown RBP14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 CUL3Q13618 768 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 SMTNL2Q2TAL5 461 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 DSTYKQ6XUX3 929 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 OTOP1Q7RTM1 612 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 OTOAQ7RTW8 1153 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 PDIK1LQ8N165 341 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 TCP10LQ8TDR4 215 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 DNAJC5Q9H3Z4 198 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 MANSC1Q9H8J5 431 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 PCSK1NQ9UHG2 260 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 CLRN2A0PK11 232 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 TJP3O95049 919 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.63□□□□□ -0.076e-7■■■■□ 24.1
UBE2D3-210ENST00000453744 SPOPLQ6IQ16 392 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 IWS1Q96ST2 819 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 SYT15Q9BQS2 421 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 TMEM109Q9BVC6 243 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 MAK16Q9BXY0 300 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 CCDC134Q9H6E4 229 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 TDRD3Q9H7E2 651 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 SAE1Q9UBE0 346 aaPredicted RBP14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 TRAF1Q13077 416 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 TFDP1Q14186 410 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 GRAMD1BQ3KR37 738 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 DNAJC24Q6P3W2 148 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 KREMEN1Q96MU8 473 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 TTC25Q96NG3 672 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 MOV10L1Q9BXT6 1211 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 ETAA1Q9NY74 926 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 ANGPTL2Q9UKU9 493 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 PCDHAC2Q9Y5I4 1007 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 TOM1L1O75674 476 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 CRKP46108 304 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 RGS9BPQ6ZS82 235 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 AAASQ9NRG9 546 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 NDE1Q9NXR1 346 aa14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 MRPL11Q9Y3B7 192 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-210ENST00000453744 MYL2P10916 166 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 GRIK3Q13003 919 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 LAMB3Q13751 1172 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 PTK6Q13882 451 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 SCARA5Q6ZMJ2 495 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 SYDE1Q6ZW31 735 aaPredicted RBP14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 CEP170P1Q96L14 293 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 LRMDAQ9H2I8 198 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 CCPG1Q9ULG6 757 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 DDTLA6NHG4 134 aaPredicted RBP14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 ARL4CP56559 192 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 CASC4Q6P4E1 433 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 RFX6Q8HWS3 928 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 RFWD2Q8NHY2 731 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 SNED1Q8TER0 1413 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 COPEO14579 308 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 FSCN2O14926 492 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 BGNP21810 368 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 GNA15P30679 374 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 ACOT2P49753 483 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 NFX1Q12986 1120 aaKnown RBP14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 AOC3Q16853 763 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 BMT2Q1RMZ1 405 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 GALNTL6Q49A17 601 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 Q4G0T1 1027 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 LRRC74BQ6ZQY2 392 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 TMEM179Q6ZVK1 233 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 TRABD2AQ86V40 505 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 SLC26A7Q8TE54 656 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 SEMA4DQ92854 862 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 WDR18Q9BV38 432 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 TMEM120AQ9BXJ8 343 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 ARL8BQ9NVJ2 186 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 STARD13Q9Y3M8 1113 aa14.62□□□□□ -0.07
UBE2D3-210ENST00000453744 ETS2P15036 469 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 ECE1P42892 770 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 EFTUD2Q15029 972 aaKnown RBP eCLIP14.61□□□□□ -0.074e-8■■■■■ 30.7
UBE2D3-210ENST00000453744 WASHC2DQ5SRD0 308 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 CCNJLQ8IV13 435 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 ARID3BQ8IVW6 561 aaPredicted RBP14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.61□□□□□ -0.075e-17■□□□□ 9.4
UBE2D3-210ENST00000453744 P2RX7Q99572 595 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 VCX3BQ9H321 246 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 VCX3AQ9NNX9 186 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 H7C0C1 242 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 EDF1O60869 148 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 ADRB2P07550 413 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 CNGA1P29973 690 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 ATP5OP48047 213 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 TUBP50607 506 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 PRR5LQ6MZQ0 368 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 IZUMO2Q6UXV1 221 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 ACAP3Q96P50 834 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 FBXO28Q9NVF7 368 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 SENP1Q9P0U3 644 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 LRCH1Q9Y2L9 728 aa14.61□□□□□ -0.07
UBE2D3-210ENST00000453744 ROBO3Q96MS0 1386 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms