RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 ZSWIM3Q96MP5 696 aa12.73□□□□□ -0.37
GARNL3-210ENST00000453030 PNMA5Q96PV4 448 aa12.73□□□□□ -0.37
GARNL3-210ENST00000453030 TRMT61BQ9BVS5 477 aaKnown RBP12.73□□□□□ -0.37
GARNL3-210ENST00000453030 HAPLN2Q9GZV7 340 aa12.73□□□□□ -0.37
GARNL3-210ENST00000453030 PRMT8Q9NR22 394 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-210ENST00000453030 CEP72Q9P209 647 aa12.73□□□□□ -0.37
GARNL3-210ENST00000453030 PCDHB8Q9UN66 801 aa12.73□□□□□ -0.37
GARNL3-210ENST00000453030 SMG5Q9UPR3 1016 aaKnown RBP12.73□□□□□ -0.37
GARNL3-210ENST00000453030 MRPS17Q9Y2R5 130 aaKnown RBP12.73□□□□□ -0.37
GARNL3-210ENST00000453030 SPAG17Q6Q759 2223 aa12.73□□□□□ -0.37
GARNL3-210ENST00000453030 ATG2BQ96BY7 2078 aa12.73□□□□□ -0.37
GARNL3-210ENST00000453030 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
GARNL3-210ENST00000453030 MOSPD3O75425 235 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 PLA2G4BP0C869 781 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 TNFSF9P41273 254 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 VIPR2P41587 438 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 RPS9P46781 194 aaKnown RBP12.72□□□□□ -0.37
GARNL3-210ENST00000453030 SLC12A3P55017 1021 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 ATP2C1P98194 919 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-210ENST00000453030 PPP2R3AQ06190 1150 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 MCL1Q07820 350 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 MTAPQ13126 283 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 TEAD2Q15562 447 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 SYT2Q8N9I0 419 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-210ENST00000453030 ZSCAN18Q8TBC5 510 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-210ENST00000453030 SMARCD2Q92925 531 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 NELL2Q99435 816 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 ZSCAN32Q9NX65 697 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 PIAS3Q9Y6X2 628 aa12.72□□□□□ -0.37
GARNL3-210ENST00000453030 HNRNPDLO14979 420 aaKnown RBP12.71□□□□□ -0.37
GARNL3-210ENST00000453030 PSMC3P17980 439 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 LIG4P49917 911 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 FZD5Q13467 585 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 PUM1Q14671 1186 aaKnown RBP eCLIP12.71□□□□□ -0.37
GARNL3-210ENST00000453030 RILPL1Q5EBL4 403 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 HYIQ5T013 277 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 USP37Q86T82 979 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 ZBTB44Q8NCP5 570 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 SHKBP1Q8TBC3 707 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 DEPDC1BQ8WUY9 529 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 IRF7Q92985 503 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 NTPCRQ9BSD7 190 aaKnown RBP12.71□□□□□ -0.37
GARNL3-210ENST00000453030 CRISPLD1Q9H336 500 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 ZNF334Q9HCZ1 680 aaPredicted RBP12.71□□□□□ -0.37
GARNL3-210ENST00000453030 UBQLN1Q9UMX0 589 aaKnown RBP12.71□□□□□ -0.37
GARNL3-210ENST00000453030 KIF3AQ9Y496 699 aa12.71□□□□□ -0.37
GARNL3-210ENST00000453030 SDK1Q7Z5N4 2213 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 A0A1W2PRU2 124 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 TTC26A0AVF1 554 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 HEPACAM2A8MVW5 462 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 K7ENM7 598 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 M0QZQ0 153 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 MAN2B1O00754 1011 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 PPEF2O14830 753 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 MICAL2O94851 1124 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 VNN2O95498 520 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 CLTAP09496 248 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 LRPAP1P30533 357 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 EPHA5P54756 1037 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 NCKAP1LP55160 1127 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 DUSP4Q13115 394 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 DHX8Q14562 1220 aaKnown RBP12.7□□□□□ -0.38
GARNL3-210ENST00000453030 ENOX2Q16206 610 aaKnown RBP12.7□□□□□ -0.38
GARNL3-210ENST00000453030 RSPO4Q2I0M5 234 aaPredicted RBP12.7□□□□□ -0.38
GARNL3-210ENST00000453030 TMEM119Q4V9L6 283 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 STXBP5Q5T5C0 1151 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 DSTYKQ6XUX3 929 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 HAUS6Q7Z4H7 955 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 GPBP1Q86WP2 473 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 TMC8Q8IU68 726 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 MAP4K3Q8IVH8 894 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 LEMD2Q8NC56 503 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 FAM3CQ92520 227 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 FAM212AQ96EL1 285 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 DNAJC25Q9H1X3 360 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 EPC1Q9H2F5 836 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 CHRDQ9H2X0 955 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 PLEKHA5Q9HAU0 1116 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 KCND2Q9NZV8 630 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 LARSQ9P2J5 1176 aaKnown RBP12.7□□□□□ -0.38
GARNL3-210ENST00000453030 CACNA1BQ00975 2339 aa12.7□□□□□ -0.38
GARNL3-210ENST00000453030 SLC38A8A6NNN8 435 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 LACTBL1A8MY62 500 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 H0YCG3 227 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 H3BQV1 296 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 ZNF263O14978 683 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 XPOTO43592 962 aaKnown RBP12.69□□□□□ -0.38
GARNL3-210ENST00000453030 LILRB5O75023 590 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 SOAT2O75908 522 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 FAM13AO94988 1023 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 GJB2P29033 226 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 AARSP49588 968 aaKnown RBP eCLIP12.69□□□□□ -0.38
GARNL3-210ENST00000453030 CDR1P51861 262 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 PLD1Q13393 1074 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 LPAL2Q16609 132 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 ARSHQ5FYA8 562 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 ERICH6BQ5W0A0 696 aa12.69□□□□□ -0.38
GARNL3-210ENST00000453030 OVOS1Q6IE37 1185 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms