RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 NUP88Q99567 741 aaPredicted RBP4.09□□□□□ -1.75
VPS8-212ENST00000452666 ANP32EQ9BTT0 268 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 PITHD1Q9GZP4 211 aaPredicted RBP4.09□□□□□ -1.75
VPS8-212ENST00000452666 ZHX3Q9H4I2 956 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 CASS4Q9NQ75 786 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 IL17RBQ9NRM6 502 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 TBCCD1Q9NVR7 557 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 WWOXQ9NZC7 414 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 POGKQ9P215 609 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 PCDHGA9Q9Y5G4 932 aaKnown RBP4.09□□□□□ -1.75
VPS8-212ENST00000452666 PCDHGA8Q9Y5G5 932 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 PCDHGA7Q9Y5G6 932 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 PCDHGA6Q9Y5G7 932 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 PCDHGA3Q9Y5H0 932 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 PCDHGA2Q9Y5H1 932 aa4.09□□□□□ -1.75
VPS8-212ENST00000452666 KRT18P05783 430 aaKnown RBP4.08□□□□□ -1.76
VPS8-212ENST00000452666 CT47B1P0C2W7 299 aaPredicted RBP4.08□□□□□ -1.76
VPS8-212ENST00000452666 PF4V1P10720 104 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 KRT10P13645 584 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 TUBA4AP68366 448 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 DUSP2Q05923 314 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 GTF2H3Q13889 308 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 ODF1Q14990 250 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 BMT2Q1RMZ1 405 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 MINDY4Q4G0A6 757 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 FAM102AQ5T9C2 384 aaPredicted RBP4.08□□□□□ -1.76
VPS8-212ENST00000452666 PPP4R4Q6NUP7 873 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 EFCAB12Q6NXP0 572 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 GET4Q7L5D6 327 aaPredicted RBP4.08□□□□□ -1.76
VPS8-212ENST00000452666 TECPR1Q7Z6L1 1165 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 TPH2Q8IWU9 490 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.08□□□□□ -1.76
VPS8-212ENST00000452666 SSH1Q8WYL5 1049 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 HSPBAP1Q96EW2 488 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 ZNF496Q96IT1 587 aaPredicted RBP4.08□□□□□ -1.76
VPS8-212ENST00000452666 MS4A5Q9H3V2 200 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 CHMP4BQ9H444 224 aaKnown RBP4.08□□□□□ -1.76
VPS8-212ENST00000452666 ARNT2Q9HBZ2 717 aa4.08□□□□□ -1.76
VPS8-212ENST00000452666 A0A0A6YYJ9 748 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 LCHNA4D1U4 455 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 ERVV-2B6SEH9 535 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 DHX16O60231 1041 aaKnown RBP4.07□□□□□ -1.76
VPS8-212ENST00000452666 MYL1P05976 194 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 CD53P19397 219 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 GPD1P21695 349 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 ITPKBP27987 946 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 POU5F1Q01860 360 aaKnown RBP4.07□□□□□ -1.76
VPS8-212ENST00000452666 HDAC1Q13547 482 aaPredicted RBP4.07□□□□□ -1.76
VPS8-212ENST00000452666 UBE4AQ14139 1066 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 BRD3Q15059 726 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 FSCN1Q16658 493 aaKnown RBP4.07□□□□□ -1.76
VPS8-212ENST00000452666 KRTAP27-1Q3LI81 207 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 EFCAB2Q5VUJ9 269 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 ICE2Q659A1 982 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 DGKHQ86XP1 1220 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 VGLL2Q8N8G2 317 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 SMRP1Q8NCR6 262 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 C1orf131Q8NDD1 294 aaKnown RBP4.07□□□□□ -1.76
VPS8-212ENST00000452666 RTF1Q92541 710 aaKnown RBP4.07□□□□□ -1.76
VPS8-212ENST00000452666 RPL36ALQ969Q0 106 aaKnown RBP4.07□□□□□ -1.76
VPS8-212ENST00000452666 SARAFQ96BY9 339 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 AIFM3Q96NN9 605 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 MPHOSPH6Q99547 160 aaKnown RBP4.07□□□□□ -1.76
VPS8-212ENST00000452666 SOX7Q9BT81 388 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 WNT8AQ9H1J5 351 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 MTG2Q9H4K7 406 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 CCM2LQ9NUG4 571 aaPredicted RBP4.07□□□□□ -1.76
VPS8-212ENST00000452666 OBP2AQ9NY56 170 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 FLRT1Q9NZU1 646 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 MSRAQ9UJ68 235 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 NOX1Q9Y5S8 564 aa4.07□□□□□ -1.76
VPS8-212ENST00000452666 XPOTO43592 962 aaKnown RBP4.06□□□□□ -1.76
VPS8-212ENST00000452666 LPOP22079 712 aaPredicted RBP4.06□□□□□ -1.76
VPS8-212ENST00000452666 ENPP1P22413 925 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 AKAP5P24588 427 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 MAN1A1P33908 653 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 MTNR1BP49286 362 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 CLUL1Q15846 466 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 ESPNLQ6ZVH7 1005 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 EPM2AIP1Q7L775 607 aaPredicted RBP4.06□□□□□ -1.76
VPS8-212ENST00000452666 PHYKPLQ8IUZ5 450 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 PIK3C3Q8NEB9 887 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 JADE3Q92613 823 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 FUBP1Q96AE4 644 aaKnown RBP4.06□□□□□ -1.76
VPS8-212ENST00000452666 HIST1H2AHQ96KK5 128 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 TEKT5Q96M29 485 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 TIMP4Q99727 224 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 HIST1H2AJQ99878 128 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 AIFM2Q9BRQ8 373 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 ZNF700Q9H0M5 742 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 PRDM11Q9NQV5 511 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 ZNF277Q9NRM2 450 aaPredicted RBP4.06□□□□□ -1.76
VPS8-212ENST00000452666 DNAJC28Q9NX36 388 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 MAP3K20Q9NYL2 800 aaKnown RBP4.06□□□□□ -1.76
VPS8-212ENST00000452666 ZBTB21Q9ULJ3 1066 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 ATP11BQ9Y2G3 1177 aa4.06□□□□□ -1.76
VPS8-212ENST00000452666 VSTM5A8MXK1 200 aa4.05□□□□□ -1.76
VPS8-212ENST00000452666 B5MCH6 92 aa4.05□□□□□ -1.76
VPS8-212ENST00000452666 ERC2O15083 957 aa4.05□□□□□ -1.76
VPS8-212ENST00000452666 INSIG1O15503 277 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms