RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 C1orf127Q8N9H9 656 aa15.13■□□□□ 0.01
GTF3C3-206ENST00000448539 MYO7AQ13402 2215 aa15.13■□□□□ 0.01
GTF3C3-206ENST00000448539 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 BICDL2A1A5D9 508 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 M0QZQ0 153 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 MAPK13O15264 365 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 PHACTR2O75167 634 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 GLUD1P00367 558 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 EPB41P11171 864 aaKnown RBP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 ODC1P11926 461 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 RPL17P18621 184 aaKnown RBP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 AARSP49588 968 aaKnown RBP eCLIP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 FKBP3Q00688 224 aaKnown RBP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 MYO1EQ12965 1108 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 COL19A1Q14993 1142 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 VARS2Q5ST30 1063 aaKnown RBP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 ANKRD40Q6AI12 368 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 INTS8Q75QN2 995 aaKnown RBP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 LRRC52Q8N7C0 313 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 OR5B17Q8NGF7 314 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 LNX1Q8TBB1 728 aaPredicted RBP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 GPT2Q8TD30 523 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 PARD3BQ8TEW8 1205 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 NELFBQ8WX92 580 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 POP1Q99575 1024 aaKnown RBP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 DPP7Q9UHL4 492 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 CTNND2Q9UQB3 1225 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 HCFC2Q9Y5Z7 792 aa15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 PDCD11Q14690 1871 aaKnown RBP15.12■□□□□ 0.01
GTF3C3-206ENST00000448539 KPNA7A9QM74 516 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 H3BQ06 376 aaPredicted RBP15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 AKAP3O75969 853 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 CLSTN1O94985 981 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 BMP1P13497 986 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 CD44P16070 742 aaKnown RBP15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 BMP6P22004 513 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 KCNQ1P51787 676 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 CLCN4P51793 760 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 VAMP7P51809 220 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 YWHAHQ04917 246 aaPredicted RBP15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 BFSP1Q12934 665 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 PAK1Q13153 545 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 BIRC3Q13489 604 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 TRPC3Q13507 836 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 CTXN3Q4LDR2 81 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 ZNF280DQ6N043 979 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 TRAPPC11Q7Z392 1133 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 METTL23Q86XA0 190 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 PALB2Q86YC2 1186 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 FAM84AQ96KN4 292 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 SENP8Q96LD8 212 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 UHRF1Q96T88 793 aaPredicted RBP15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 MKNK1Q9BUB5 465 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 DZANK1Q9NVP4 752 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 MTRRQ9UBK8 725 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 DSEQ9UL01 958 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 BARX2Q9UMQ3 279 aaPredicted RBP15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 BACE2Q9Y5Z0 518 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 PTPRJQ12913 1337 aa15.11■□□□□ 0.01
GTF3C3-206ENST00000448539 TRIM49BA6NDI0 452 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 LRRIQ3A6PVS8 624 aaPredicted RBP15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 PPP1R3GB7ZBB8 358 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 CYB561D2O14569 222 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 SPTLC1O15269 473 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 TBX10O75333 385 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 GLP2RO95838 553 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 EPCAMP16422 314 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 TYMPP19971 482 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 PMS1P54277 932 aaKnown RBP15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 RBM10P98175 930 aaKnown RBP15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 CLUL1Q15846 466 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 PUS10Q3MIT2 529 aaKnown RBP15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 LEXMQ3ZCV2 418 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 ANKRD54Q6NXT1 300 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 TMEM184AQ6ZMB5 413 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 MLKLQ8NB16 471 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 VN1R2Q8NFZ6 395 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 SLC22A17Q8WUG5 538 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 EEF2KMTQ96G04 330 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 NECAB3Q96P71 396 aaPredicted RBP15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 CLSTN3Q9BQT9 956 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 DACH1Q9UI36 760 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 SIX4Q9UIU6 781 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 CD207Q9UJ71 328 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 FAM50BQ9Y247 325 aa15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 TIMM13Q9Y5L4 95 aaPredicted RBP15.1■□□□□ 0.01
GTF3C3-206ENST00000448539 ATG2AQ2TAZ0 1938 aa15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 TCF20Q9UGU0 1960 aaKnown RBP15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 IKBKBO14920 756 aa15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 SLC16A3O15427 465 aaKnown RBP15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 HUS1O60921 280 aa15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 C1RP00736 705 aa15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 HOXB8P17481 243 aaPredicted RBP15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 OR1D2P34982 312 aa15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 LTBRP36941 435 aa15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 ARPP19P56211 112 aa15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 STX17P56962 302 aa15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 DLX2Q07687 328 aaPredicted RBP15.09■□□□□ 0.01
GTF3C3-206ENST00000448539 KCNC3Q14003 757 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms