RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 MXD3Q9BW11 206 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 KLHL4Q9C0H6 718 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 IARS2Q9NSE4 1012 aaKnown RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 RGPD5Q99666 1765 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 TULP2O00295 520 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 GFPT2O94808 682 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 SMARCA1P28370 1054 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 SERPINH1P50454 418 aaKnown RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 PEX5P50542 639 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 CCNHP51946 323 aaPredicted RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 RHOT2Q8IXI1 618 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 FUKQ8N0W3 1084 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 LENG1Q96BZ8 264 aaPredicted RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 SHISA4Q96DD7 197 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 CHID1Q9BWS9 393 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 GTSE1Q9NYZ3 720 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 REXO2Q9Y3B8 237 aaKnown RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 PCDHA1Q9Y5I3 950 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 SAC3D1A6NKF1 404 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 TRIM64CA6NLI5 447 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 SORBS3O60504 671 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 EFCAB14O75071 495 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 TOMM70O94826 608 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 NTSR2O95665 410 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 ENO3P13929 434 aaPredicted RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 SOX6P35712 828 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 PTK2Q05397 1052 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 HIF1AQ16665 826 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 ANO4Q32M45 955 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 SNX30Q5VWJ9 437 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 LRRC34Q8IZ02 419 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 GLT8D2Q9H1C3 349 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 ZNF277Q9NRM2 450 aaPredicted RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 GGA1Q9UJY5 639 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 IVNS1ABPQ9Y6Y0 642 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 ADGRA3Q8IWK6 1321 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 SRGNP10124 158 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 FKBP3Q00688 224 aaKnown RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 ITGADQ13349 1161 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 ZNF211Q13398 564 aaPredicted RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 GRIK5Q16478 980 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 FAM83BQ5T0W9 1011 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 POTEGQ6S5H5 508 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 TRIM69Q86WT6 500 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 STX12Q86Y82 276 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 NEUROG2Q9H2A3 272 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 EPS8L2Q9H6S3 715 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 HACD3Q9P035 362 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 SNX12Q9UMY4 172 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 PRR23AA6NEV1 266 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 FAM47DPA6NHR8 397 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 NKRFO15226 690 aaKnown RBP eCLIP9.66□□□□□ -0.865e-6■□□□□ 8.5
SMC6-207ENST00000448223 ALBP02768 609 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 FAM58BPP0C7Q3 252 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 CDH3P22223 829 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 DYNLT1P63172 113 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 ZNF618Q5T7W0 954 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 KRT39Q6A163 491 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 CCDC81Q6ZN84 652 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 TRAPPC11Q7Z392 1133 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 BHMTQ93088 406 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 NUDT12Q9BQG2 462 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 OSBPL8Q9BZF1 889 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 PLGRKTQ9HBL7 147 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 ALG13Q9NP73 1137 aaKnown RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 BARHL2Q9NY43 387 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 MARF1Q9Y4F3 1742 aaKnown RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 CDH16O75309 829 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 GDF11O95390 407 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 HABP4Q5JVS0 413 aaKnown RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 SH3RF1Q7Z6J0 888 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 ARHGEF1Q92888 912 aaKnown RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 EFHD2Q96C19 240 aaPredicted RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 PACSIN1Q9BY11 444 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 HAO1Q9UJM8 370 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 COL4A3BPQ9Y5P4 624 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 PSTPIP1O43586 416 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 PGM3O95394 542 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 IFNA8P32881 189 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 PBX1P40424 430 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 GCLCP48506 637 aaPredicted RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 RCAN1P53805 252 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 MFAP3P55082 362 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 FAM45BPQ6NSW5 357 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 TTI2Q6NXR4 508 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 DGKHQ86XP1 1220 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 ACAP3Q96P50 834 aa9.66□□□□□ -0.86
SMC6-207ENST00000448223 REXO4Q9GZR2 422 aaKnown RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 THRAP3Q9Y2W1 955 aaKnown RBP9.66□□□□□ -0.86
SMC6-207ENST00000448223 TMEM120BA0PK00 339 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 ARHGEF37A1IGU5 675 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 USP17L10C9JJH3 530 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 UBAP1LF5GYI3 381 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 ZSCAN9O15535 394 aaPredicted RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 SRGAP2BP0DMP2 458 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 FGFR4P22455 802 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 TUFMP49411 452 aaKnown RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 AOC3Q16853 763 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms