RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ZNF518BQ9C0D4 1074 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 PAIP1Q9H074 479 aaKnown RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 MLXIPQ9HAP2 919 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 TMEM8AQ9HCN3 771 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 ATP13A1Q9HD20 1204 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 SLC39A2Q9NP94 309 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 INCENPQ9NQS7 918 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 KCND1Q9NSA2 647 aa4.35□□□□□ -1.71
PMS1-216ENST00000447734 NFKBIL1Q9UBC1 381 aaPredicted RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 SCAF8Q9UPN6 1271 aaKnown RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 MYBBP1AQ9BQG0 1328 aaKnown RBP4.35□□□□□ -1.71
PMS1-216ENST00000447734 PABPN1LA6NDY0 278 aaKnown RBP4.34□□□□□ -1.71
PMS1-216ENST00000447734 PYCARD-AS1I3L0S3 204 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 FCHO1O14526 889 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 WNT11O96014 354 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 HSP90AB1P08238 724 aaKnown RBP4.34□□□□□ -1.71
PMS1-216ENST00000447734 GLI4P10075 376 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 JUPP14923 745 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 GLULP15104 373 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 AKR1B1P15121 316 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 HDCP19113 662 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 RXRAP19793 462 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 FUT4P22083 530 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 GABRB3P28472 473 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 PIK3CGP48736 1102 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 PRKAA2P54646 552 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 ROR1Q01973 937 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 EXOSC9Q06265 439 aaKnown RBP4.34□□□□□ -1.71
PMS1-216ENST00000447734 ADAM9Q13443 819 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 CUL4BQ13620 913 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 PLCB4Q15147 1175 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 CD276Q5ZPR3 534 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 RNF43Q68DV7 783 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 BICRALQ6AI39 1079 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 GALNT18Q6P9A2 607 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 BMP8AQ7Z5Y6 402 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 MICU3Q86XE3 530 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 SHKBP1Q8TBC3 707 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 ADAMTS15Q8TE58 950 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 ST8SIA4Q92187 359 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 TNPO1Q92973 898 aaKnown RBP4.34□□□□□ -1.71
PMS1-216ENST00000447734 SNX27Q96L92 541 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 PDCD2LQ9BRP1 358 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 AGXT2Q9BYV1 514 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 OSBPL6Q9BZF3 934 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 SMURF2Q9HAU4 748 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 SLAMF7Q9NQ25 335 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 GALNT8Q9NY28 637 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 NUDT5Q9UKK9 219 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 PLAGL2Q9UPG8 496 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 MED16Q9Y2X0 877 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 PITPNM2Q9BZ72 1349 aa4.34□□□□□ -1.71
PMS1-216ENST00000447734 PI4KAP2A4QPH2 592 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 MBD3L4A6NDZ8 208 aaPredicted RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 MBD3L3A6NE82 208 aaPredicted RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 NT5C1B-RDH14C9J2C7 533 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 F2RL2O00254 374 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 P4HA2O15460 535 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 DOK2O60496 412 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 GPR32O75388 356 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ACTL6BO94805 426 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 STARD3NLO95772 234 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ABHD16AO95870 558 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 DNTTP04053 509 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 C8AP07357 584 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 HNRNPA1P09651 372 aaKnown RBP eCLIP4.33□□□□□ -1.72
PMS1-216ENST00000447734 LTA4HP09960 611 aaKnown RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 GYS1P13807 737 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 IL1R1P14778 569 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 PRKCAP17252 672 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ALOX12P18054 663 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 CHMP24386 653 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 KLRC1P26715 233 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 POLD2P49005 469 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 AARSP49588 968 aaKnown RBP eCLIP4.33□□□□□ -1.72
PMS1-216ENST00000447734 CCR5P51681 352 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 COPAP53621 1224 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 RNASE9P60153 205 aaKnown RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 ACTR2P61160 394 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ARF3P61204 181 aaPredicted RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 AP2B1P63010 937 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ARF1P84077 181 aaKnown RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 ZNF200P98182 395 aaPredicted RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 CHRNDQ07001 517 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 FSTL1Q12841 308 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 MAP3K12Q12852 859 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ERV3-1Q14264 604 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 HABP2Q14520 560 aaPredicted RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 MAN2A1Q16706 1144 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 DGKDQ16760 1214 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 TSTQ16762 297 aaKnown RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 MST1LQ2TV78 715 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 CCDC92Q53HC0 331 aaPredicted RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 EMC10Q5UCC4 262 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ACAD10Q6JQN1 1059 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 Q6ZVL8 140 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 CBLL1Q75N03 491 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 B4GALNT4Q76KP1 1039 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ZSCAN30Q86W11 494 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms