RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 DSTYKQ6XUX3 929 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 FMNL3Q8IVF7 1028 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 COLGALT1Q8NBJ5 622 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 CLP1Q92989 425 aaKnown RBP9.91□□□□□ -0.82
CCDC18-205ENST00000447456 JAKMIP2Q96AA8 810 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 TMEM169Q96HH4 297 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 MRFAP1L1Q96HT8 127 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 LSM14BQ9BX40 385 aaKnown RBP9.91□□□□□ -0.82
CCDC18-205ENST00000447456 NIF3L1Q9GZT8 377 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 CWH43Q9H720 699 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 CYP3A43Q9HB55 503 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 GDAP2Q9NXN4 497 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 SPG21Q9NZD8 308 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 APEX2Q9UBZ4 518 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 DNAJB4Q9UDY4 337 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 ADAM28Q9UKQ2 775 aa9.91□□□□□ -0.82
CCDC18-205ENST00000447456 PRG3Q9Y2Y8 225 aaPredicted RBP9.91□□□□□ -0.82
CCDC18-205ENST00000447456 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCDC18-205ENST00000447456 MRPL42Q9Y6G3 142 aaKnown RBP9.91□□□□□ -0.82
CCDC18-205ENST00000447456 CHD9Q3L8U1 2897 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 TEX33O43247 280 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 RB1P06400 928 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 FAM163BP0C2L3 166 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 ODC1P11926 461 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 ZNF75DP51815 510 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 RABGGTBP53611 331 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 MFAP3P55082 362 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 GCNT1Q02742 428 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 BMS1Q14692 1282 aaKnown RBP9.9□□□□□ -0.82
CCDC18-205ENST00000447456 SPECC1LQ69YQ0 1117 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 DPH6Q7L8W6 267 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 PPFIBP1Q86W92 1011 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 METTL23Q86XA0 190 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 DRC7Q8IY82 874 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 PPM1KQ8N3J5 372 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 APPL2Q8NEU8 664 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 ZNF397Q8NF99 534 aaPredicted RBP9.9□□□□□ -0.82
CCDC18-205ENST00000447456 CXorf38Q8TB03 319 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 SPATA18Q8TC71 538 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 SEMA4DQ92854 862 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 FAM84AQ96KN4 292 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 MMS19Q96T76 1030 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 PLVAPQ9BX97 442 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 EDEM3Q9BZQ6 932 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 XYLT2Q9H1B5 865 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 NXF1Q9UBU9 619 aaKnown RBP9.9□□□□□ -0.82
CCDC18-205ENST00000447456 PUF60Q9UHX1 559 aaKnown RBP9.9□□□□□ -0.82
CCDC18-205ENST00000447456 SIK3Q9Y2K2 1263 aa9.9□□□□□ -0.82
CCDC18-205ENST00000447456 ITIH6Q6UXX5 1313 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 LINC01553A4QN01 128 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 CYB561D2O14569 222 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 KIF4AO95239 1232 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 ADCY5O95622 1261 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 SLC9A1P19634 815 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 CTNNB1P35222 781 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 BMPR1AP36894 532 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 AARSP49588 968 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC18-205ENST00000447456 SMAD3P84022 425 aaKnown RBP9.89□□□□□ -0.83
CCDC18-205ENST00000447456 CUL2Q13617 745 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 KLHDC7AQ5VTJ3 777 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 PRPF38BQ5VTL8 546 aaKnown RBP9.89□□□□□ -0.83
CCDC18-205ENST00000447456 PDXDC1Q6P996 788 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 CACNA2D4Q7Z3S7 1137 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.89□□□□□ -0.83
CCDC18-205ENST00000447456 TMEM86AQ8N2M4 240 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 TOP6BLQ8N6T0 577 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 LMO3Q8TAP4 145 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 IGSF21Q96ID5 467 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 SUSD3Q96L08 255 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 TGS1Q96RS0 853 aaKnown RBP9.89□□□□□ -0.83
CCDC18-205ENST00000447456 PAAF1Q9BRP4 392 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 PI4K2AQ9BTU6 479 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 C11orf84Q9BUA3 381 aaPredicted RBP9.89□□□□□ -0.83
CCDC18-205ENST00000447456 UBE2TQ9NPD8 197 aaPredicted RBP9.89□□□□□ -0.83
CCDC18-205ENST00000447456 FAM207AQ9NSI2 230 aaPredicted RBP9.89□□□□□ -0.83
CCDC18-205ENST00000447456 FBXL5Q9UKA1 691 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 PCDHB8Q9UN66 801 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 SNX9Q9Y5X1 595 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 PTPRSQ13332 1948 aa9.89□□□□□ -0.83
CCDC18-205ENST00000447456 TRIOBPQ9H2D6 2365 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 TRANK1O15050 2925 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 GRXCR1A8MXD5 290 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 M0QZQ0 153 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 PPEF2O14830 753 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 SYN3O14994 580 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 B4GALT3O60512 393 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 CA3P07451 260 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 CCDC172P0C7W6 258 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 UCHL3P15374 230 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 TYMPP19971 482 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 CDC25BP30305 580 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 LHX1P48742 406 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 POLR2FP61218 127 aaKnown RBP9.88□□□□□ -0.83
CCDC18-205ENST00000447456 UBE3AQ05086 875 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 LRMPQ12912 555 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 RAPGEF1Q13905 1077 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 TSR1Q2NL82 804 aaKnown RBP9.88□□□□□ -0.83
CCDC18-205ENST00000447456 USP41Q3LFD5 358 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 TIGD5Q53EQ6 642 aa9.88□□□□□ -0.83
CCDC18-205ENST00000447456 FIGNQ5HY92 759 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms