RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 H3BRJ5 948 aa8.42□□□□□ -1.06
RIF1-205ENST00000444746 KRT34O76011 436 aa8.42□□□□□ -1.06
RIF1-205ENST00000444746 CYFIP2Q96F07 1278 aa8.42□□□□□ -1.06
RIF1-205ENST00000444746 CCDC138Q96M89 665 aa8.42□□□□□ -1.06
RIF1-205ENST00000444746 TRIM4Q9C037 500 aa8.42□□□□□ -1.06
RIF1-205ENST00000444746 CROCC2H7BZ55 1655 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 DGAT1O75907 488 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 CCHCR1Q8TD31 782 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 SMAD5Q99717 465 aaKnown RBP8.41□□□□□ -1.06
RIF1-205ENST00000444746 SENP7Q9BQF6 1050 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 TXLNGQ9NUQ3 528 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 NUDT5Q9UKK9 219 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 NCF1BA6NI72 391 aaPredicted RBP8.41□□□□□ -1.06
RIF1-205ENST00000444746 NCF1CA8MVU1 366 aaPredicted RBP8.41□□□□□ -1.06
RIF1-205ENST00000444746 PHF2O75151 1096 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 NCF1P14598 390 aaPredicted RBP8.41□□□□□ -1.06
RIF1-205ENST00000444746 EIF3BP55884 814 aaKnown RBP8.41□□□□□ -1.06
RIF1-205ENST00000444746 DEUP1Q05D60 604 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 ZNF235Q14590 738 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 NAB2Q15742 525 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 GNASQ5JWF2 1037 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 IFNEQ86WN2 208 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 COPS5Q92905 334 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 TBX20Q9UMR3 447 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 DNAJC6O75061 913 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 ITGA4P13612 1032 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 RPA1P27694 616 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 THPOP40225 353 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 TMA16Q96EY4 203 aaKnown RBP8.41□□□□□ -1.06
RIF1-205ENST00000444746 CCDC90BQ9GZT6 254 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 STAP1Q9ULZ2 295 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 CDC42BPBQ9Y5S2 1711 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 CASTOR2A6NHX0 329 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 HIF1AQ16665 826 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 THEMIS2Q5TEJ8 643 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 KRT80Q6KB66 452 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 LRRC8EQ6NSJ5 796 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 KLC3Q6P597 504 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 CLEC17AQ6ZS10 378 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 SEL1LQ9UBV2 794 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 STRIP2Q9ULQ0 834 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 DIP2AQ14689 1571 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 SHMT1P34896 483 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 RCAN1P53805 252 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 CASP7P55210 303 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 BTKQ06187 659 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 ISLR2Q6UXK2 745 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 TAS1R2Q8TE23 839 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 FAM81BQ96LP2 452 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 LRRIQ3A6PVS8 624 aaPredicted RBP8.41□□□□□ -1.06
RIF1-205ENST00000444746 KCNA2P16389 499 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 TAC1P20366 129 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 NPTX2P47972 431 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 SNAPC2Q13487 334 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 PRAMEF19Q5SWL8 479 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 DAB2IPQ5VWQ8 1189 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 LONP2Q86WA8 852 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 SMARCAD1Q9H4L7 1026 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 SYNDIG1Q9H7V2 258 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 SETD4Q9NVD3 440 aa8.41□□□□□ -1.06
RIF1-205ENST00000444746 A0A087WZ62 844 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 FAM86B1E9PN63 330 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 SLC16A3O15427 465 aaKnown RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 FAM86B2P0C5J1 330 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 NCAM1P13591 858 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 VCAM1P19320 739 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 DNAJB2P25686 324 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 RAD23BP54727 409 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 MAP3K7CLP57077 242 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 TMED1Q13445 227 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 NTRK3Q16288 839 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 FASTKD5Q7L8L6 764 aaKnown RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 ZNF571Q7Z3V5 609 aaPredicted RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 CDKL3Q8IVW4 592 aaPredicted RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 WDR75Q8IWA0 830 aaKnown RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 ULK4Q96C45 1275 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 FDXACB1Q9BRP7 624 aaPredicted RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 SPHKAPQ2M3C7 1700 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 EML1O00423 815 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 PRPF4O43172 522 aaKnown RBP eCLIP8.4□□□□□ -1.062e-8■■■□□ 15.8
RIF1-205ENST00000444746 TSPAN3O60637 253 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 KLHL38Q2WGJ6 581 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 GLE1Q53GS7 698 aaKnown RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 MIB1Q86YT6 1006 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.4□□□□□ -1.062e-6■■■■■ 54.9
RIF1-205ENST00000444746 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 RRAGCQ9HB90 399 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 DIS3Q9Y2L1 958 aaKnown RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 UNC13BO14795 1591 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 AKAP3O75969 853 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 KRT38O76015 456 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 CDH8P55286 799 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 RBP5P82980 135 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 USP10Q14694 798 aaKnown RBP8.4□□□□□ -1.06
RIF1-205ENST00000444746 TRIM42Q8IWZ5 723 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 ATL2Q8NHH9 583 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 PNMA5Q96PV4 448 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 OSBPL8Q9BZF1 889 aa8.4□□□□□ -1.06
RIF1-205ENST00000444746 CAPN10Q9HC96 672 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms