RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 FLRT1Q9NZU1 646 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 ADAM22Q9P0K1 906 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 PCDHA3Q9Y5H8 950 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 MROH7Q68CQ1 1323 aa16.72■□□□□ 0.27
SNX13-204ENST00000444712 MED7O43513 233 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 CALB1P05937 261 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 KRT19P08727 400 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 ASPAP45381 313 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 PSEN2P49810 448 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 SLC7A5Q01650 507 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 SMC1AQ14683 1233 aaKnown RBP16.71■□□□□ 0.27
SNX13-204ENST00000444712 TMEM132DQ14C87 1099 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 JADE1Q6IE81 842 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 KLHL7Q8IXQ5 586 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 HDAC7Q8WUI4 952 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 BCO2Q9BYV7 579 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 UBXN6Q9BZV1 441 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 PLEKHA5Q9HAU0 1116 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 CYP3A43Q9HB55 503 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 ANAPC7Q9UJX3 599 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 ITGA11Q9UKX5 1188 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 PCDHGC3Q9UN70 934 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 DERAQ9Y315 318 aa16.71■□□□□ 0.27
SNX13-204ENST00000444712 MYO1FO00160 1098 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 HAS3O00219 553 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 ZMYND10O75800 440 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 NFICP08651 508 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 GNAT1P11488 350 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 CYP2C9P11712 490 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 CYP2B6P20813 491 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 AXLP30530 894 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 PRAMEF19Q5SWL8 479 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 DCAF12L1Q5VU92 463 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 C1orf127Q8N9H9 656 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 TMEM35BQ8NCS4 154 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 ADAMTS10Q9H324 1103 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNX13-204ENST00000444712 TLL2Q9Y6L7 1015 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 SART1O43290 800 aaKnown RBP16.7■□□□□ 0.26
SNX13-204ENST00000444712 RAD51CO43502 376 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 KPNA6O60684 536 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 STAU1O95793 577 aaKnown RBP16.7■□□□□ 0.26
SNX13-204ENST00000444712 PAEPP09466 180 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 CD58P19256 250 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 RRM1P23921 792 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 CYP2C19P33261 490 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 RWDD2BP57060 319 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 GUCY2DQ02846 1103 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 GABPB1Q06547 395 aaPredicted RBP16.7■□□□□ 0.26
SNX13-204ENST00000444712 CUL1Q13616 776 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 PDCD11Q14690 1871 aaKnown RBP16.7■□□□□ 0.26
SNX13-204ENST00000444712 KAT2BQ92831 832 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 CAVIN3Q969G5 261 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 RUNDC3BQ96NL0 473 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 EPB41L5Q9HCM4 733 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNX13-204ENST00000444712 GJD2Q9UKL4 321 aa16.7■□□□□ 0.26
SNX13-204ENST00000444712 CSDE1O75534 798 aaKnown RBP16.69■□□□□ 0.26
SNX13-204ENST00000444712 ITGB3P05106 788 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 AKR1A1P14550 325 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 EIF4BP23588 611 aaKnown RBP16.69■□□□□ 0.26
SNX13-204ENST00000444712 PEX5P50542 639 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 LACTBP83111 547 aaPredicted RBP16.69■□□□□ 0.26
SNX13-204ENST00000444712 SLC10A6Q3KNW5 377 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 HSP90B2PQ58FF3 399 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 NOTUMQ6P988 496 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 SLC27A1Q6PCB7 646 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 CATSPER4Q7RTX7 472 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.69■□□□□ 0.26
SNX13-204ENST00000444712 ALG3Q92685 438 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 C11orf70Q9BRQ4 267 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 AP1M1Q9BXS5 423 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 PARVAQ9NVD7 372 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 SIX4Q9UIU6 781 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 GPR32O75388 356 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 CALCAP01258 141 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 IGHA2P01877 340 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 GLI1P08151 1106 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 CDH5P33151 784 aaPredicted RBP16.69■□□□□ 0.26
SNX13-204ENST00000444712 RBP5P82980 135 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 TAP1Q03518 808 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 KIZQ2M2Z5 673 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 PLEKHA7Q6IQ23 1121 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 MAIP1Q8WWC4 291 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 FAM49AQ9H0Q0 323 aaPredicted RBP16.69■□□□□ 0.26
SNX13-204ENST00000444712 MED4Q9NPJ6 270 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 NXF1Q9UBU9 619 aaKnown RBP16.69■□□□□ 0.26
SNX13-204ENST00000444712 MTUS1Q9ULD2 1270 aa16.69■□□□□ 0.26
SNX13-204ENST00000444712 FAM170AA1A519 330 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 MYL3P08590 195 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 MYBL2P10244 700 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 MMP8P22894 467 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 MAN1A1P33908 653 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 YARSP54577 528 aaKnown RBP16.68■□□□□ 0.26
SNX13-204ENST00000444712 FAM193AP78312 1265 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 DHX34Q14147 1143 aaKnown RBP16.68■□□□□ 0.26
SNX13-204ENST00000444712 CCL14Q16627 93 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 WDR72Q3MJ13 1102 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms