RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 ANKRD54Q6NXT1 300 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 WDR49Q8IV35 697 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 LNX1Q8TBB1 728 aaPredicted RBP13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 SENP8Q96LD8 212 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 FBXL18Q96ME1 805 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 NUP62CLQ9H1M0 184 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 CLSTN2Q9H4D0 955 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 RXFP1Q9HBX9 757 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 INTS13Q9NVM9 706 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 ITGA11Q9UKX5 1188 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 CTNND2Q9UQB3 1225 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 TRAF3IP3Q9Y228 551 aa13.17□□□□□ -0.3
SLC48A1-202ENST00000442892 TRIM49BA6NDI0 452 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 PIRO00625 290 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 CYB561D2O14569 222 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 SYN3O14994 580 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 SPTLC1O15269 473 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 ADAM12O43184 909 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 TGM5O43548 720 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 KRT13P13646 458 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 CPB1P15086 417 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 IL9P15248 144 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 RBP5P82980 135 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 YWHAHQ04917 246 aaPredicted RBP13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 TRPC3Q13507 836 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 LIN9Q5TKA1 542 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 TMC5Q6UXY8 1006 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 CLEC17AQ6ZS10 378 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 METTL23Q86XA0 190 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 SLC9A9Q8IVB4 645 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 ELOA2Q8IYF1 753 aaPredicted RBP13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 FAM186BQ8IYM0 893 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 SPATA20Q8TB22 786 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 CLSTN3Q9BQT9 956 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 GTPBP4Q9BZE4 634 aaKnown RBP13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 MTRRQ9UBK8 725 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 FAM50BQ9Y247 325 aa13.16□□□□□ -0.3
SLC48A1-202ENST00000442892 ANO9A1A5B4 782 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 ARHGEF37A1IGU5 675 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 LRRIQ3A6PVS8 624 aaPredicted RBP13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 CETN3O15182 167 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 MBTPS2O43462 519 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 TRIM49P0CI25 452 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 TRIM49CP0CI26 452 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 PSMC2P35998 433 aaKnown RBP13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 PNPLA4P41247 253 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 CDR1P51861 262 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 STX17P56962 302 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 MYO1EQ12965 1108 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 SMAD4Q13485 552 aaKnown RBP13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 MORC3Q14149 939 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 COL19A1Q14993 1142 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 ANKRD40Q6AI12 368 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 SCARA3Q6AZY7 606 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 OVOS1Q6IE37 1185 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 CES5AQ6NT32 575 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 RSPO2Q6UXX9 243 aaPredicted RBP13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 TRAPPC11Q7Z392 1133 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 ADSSL1Q8N142 457 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 KREMEN2Q8NCW0 462 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 PLEKHO2Q8TD55 490 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 ADAMTS19Q8TE59 1207 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 NELFBQ8WX92 580 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 MFSD14AQ96MC6 490 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 SFXN1Q9H9B4 322 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 DMAC2Q9NW81 257 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 KIAA1468Q9P260 1216 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 CDH22Q9UJ99 828 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 FBXL5Q9UKA1 691 aa13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
SLC48A1-202ENST00000442892 GRXCR2A6NFK2 248 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 KPNA7A9QM74 516 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 M0QZQ0 153 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 HUS1O60921 280 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 AKAP3O75969 853 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 OR4Q2P0C623 313 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 EPB41P11171 864 aaKnown RBP13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 VAMP7P51809 220 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 PMS1P54277 932 aaKnown RBP13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 DLG4P78352 724 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 KCNC3Q14003 757 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 DCAF17Q5H9S7 520 aaPredicted RBP13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 TCERG1LQ5VWI1 586 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 SYCE2Q6PIF2 218 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 SMRP1Q8NCR6 262 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 GPT2Q8TD30 523 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 HPDLQ96IR7 371 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 NECAB3Q96P71 396 aaPredicted RBP13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 PIDD1Q9HB75 910 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.14□□□□□ -0.314e-6■■■■■ 34.2
SLC48A1-202ENST00000442892 DPP7Q9UHL4 492 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms