RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 CXCL8P10145 99 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 PDIA4P13667 645 aaKnown RBP12.48□□□□□ -0.41
IRF1-204ENST00000439555 TGM1P22735 817 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 ELF1P32519 619 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 MATR3P43243 847 aaKnown RBP eCLIP12.48□□□□□ -0.41
IRF1-204ENST00000439555 AARSP49588 968 aaKnown RBP eCLIP12.48□□□□□ -0.41
IRF1-204ENST00000439555 ROR1Q01973 937 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 PRKCQQ04759 706 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 PPP2R3AQ06190 1150 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 DHX8Q14562 1220 aaKnown RBP12.48□□□□□ -0.41
IRF1-204ENST00000439555 SLFN12LQ6IEE8 588 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 MTSS1LQ765P7 747 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 GET4Q7L5D6 327 aaPredicted RBP12.48□□□□□ -0.41
IRF1-204ENST00000439555 TCEAL8Q8IYN2 117 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 FGF13Q92913 245 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 HVCN1Q96D96 273 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 EPSTI1Q96J88 318 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 FAM126AQ9BYI3 521 aaPredicted RBP12.48□□□□□ -0.41
IRF1-204ENST00000439555 EPC1Q9H2F5 836 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 RPF1Q9H9Y2 349 aaKnown RBP12.48□□□□□ -0.41
IRF1-204ENST00000439555 ZSCAN32Q9NX65 697 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 SEL1LQ9UBV2 794 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 CDV3Q9UKY7 258 aaKnown RBP12.48□□□□□ -0.41
IRF1-204ENST00000439555 PCDHB8Q9UN66 801 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 DERAQ9Y315 318 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 STYXL1Q9Y6J8 313 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 SPTBN2O15020 2390 aa12.48□□□□□ -0.41
IRF1-204ENST00000439555 CHD6Q8TD26 2715 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 LACTBL1A8MY62 500 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 CCL16O15467 120 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 LAMTOR5O43504 91 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 MICAL2O94851 1124 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 MARCKSP29966 332 aaPredicted RBP12.47□□□□□ -0.41
IRF1-204ENST00000439555 MCM4P33991 863 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 TXLNAP40222 546 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 SLC39A14Q15043 492 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 ENOX2Q16206 610 aaKnown RBP12.47□□□□□ -0.41
IRF1-204ENST00000439555 PABPC1LQ4VXU2 614 aaKnown RBP12.47□□□□□ -0.41
IRF1-204ENST00000439555 SEZ6Q53EL9 994 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 ZNF280DQ6N043 979 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 ZNF720Q7Z2F6 126 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 DDX12PQ92771 950 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 KIF12Q96FN5 646 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 NELL2Q99435 816 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 ASB7Q9H672 318 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 GDE1Q9NZC3 331 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 DNMT3BQ9UBC3 853 aaKnown RBP12.47□□□□□ -0.41
IRF1-204ENST00000439555 FBXL5Q9UKA1 691 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 CPSF3Q9UKF6 684 aaKnown RBP12.47□□□□□ -0.41
IRF1-204ENST00000439555 POLIQ9UNA4 740 aa12.47□□□□□ -0.41
IRF1-204ENST00000439555 WDR27A2RRH5 827 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 K7ELQ4 463 aaPredicted RBP12.46□□□□□ -0.41
IRF1-204ENST00000439555 GAP43P17677 238 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 PTPN2P17706 415 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 TNFSF9P41273 254 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 NTHL1P78549 312 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 POSTNQ15063 836 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 CTXN3Q4LDR2 81 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 SPATA1Q5VX52 437 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 RRAGBQ5VZM2 374 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 SLC39A4Q6P5W5 647 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 CCDC73Q6ZRK6 1079 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 SV2BQ7L1I2 683 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 BEST2Q8NFU1 509 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 MSTO1Q9BUK6 570 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 STRA6Q9BX79 667 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 ZHX3Q9H4I2 956 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 TUBGCP4Q9UGJ1 667 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 AFF4Q9UHB7 1163 aaKnown RBP12.46□□□□□ -0.41
IRF1-204ENST00000439555 MTMR6Q9Y217 621 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 NUMBLQ9Y6R0 609 aa12.46□□□□□ -0.41
IRF1-204ENST00000439555 OR6C75A6NL08 312 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 PRRG1O14668 218 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 ZNF197O14709 1029 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 NCAM2O15394 837 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 STX6O43752 255 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 LRP3O75074 770 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 PPP1R37O75864 691 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 LRG1P02750 347 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 RHOP08100 348 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 TYMPP19971 482 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 NMT1P30419 496 aaKnown RBP12.45□□□□□ -0.42
IRF1-204ENST00000439555 RPS9P46781 194 aaKnown RBP12.45□□□□□ -0.42
IRF1-204ENST00000439555 YWHAHQ04917 246 aaPredicted RBP12.45□□□□□ -0.42
IRF1-204ENST00000439555 PARM1Q6UWI2 310 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 NPAS3Q8IXF0 933 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 LEMD2Q8NC56 503 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 ITFG1Q8TB96 612 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 SNX21Q969T3 373 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 CLDN23Q96B33 292 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 USP28Q96RU2 1077 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 FOXQ1Q9C009 403 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 CYP4F11Q9HBI6 524 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 OLFML3Q9NRN5 406 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 SPATA6Q9NWH7 488 aaPredicted RBP12.45□□□□□ -0.42
IRF1-204ENST00000439555 MRPS23Q9Y3D9 190 aaKnown RBP12.45□□□□□ -0.42
IRF1-204ENST00000439555 C2CD2Q9Y426 696 aa12.45□□□□□ -0.42
IRF1-204ENST00000439555 NOTCH4Q99466 2003 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms