RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 PRPF38BQ5VTL8 546 aaKnown RBP18.05■□□□□ 0.48
CALD1-209ENST00000436461 GJB7Q6PEY0 223 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 SCARA5Q6ZMJ2 495 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 SLC39A11Q8N1S5 342 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 LRRC52Q8N7C0 313 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 EHBP1Q8NDI1 1231 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 B3GALT6Q96L58 329 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 ZNF560Q96MR9 790 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 COLEC11Q9BWP8 271 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 GPR62Q9BZJ7 368 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 MSRAQ9UJ68 235 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 ADAM28Q9UKQ2 775 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 SNX9Q9Y5X1 595 aa18.05■□□□□ 0.48
CALD1-209ENST00000436461 TRIOBPQ9H2D6 2365 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 SZT2Q5T011 3432 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 TSC2P49815 1807 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 GOLGA6L3A6NEY3 463 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 KPNA7A9QM74 516 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 PMM2O15305 246 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 CETN1Q12798 172 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 SGSM1Q2NKQ1 1148 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 PPP2R2DQ66LE6 453 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 TRIM65Q6PJ69 517 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 ARHGEF19Q8IW93 802 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 IGSF21Q96ID5 467 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 LSM14BQ9BX40 385 aaKnown RBP18.04■□□□□ 0.48
CALD1-209ENST00000436461 VN1R3Q9BXE9 311 aa18.04■□□□□ 0.48
CALD1-209ENST00000436461 TIMM13Q9Y5L4 95 aaPredicted RBP18.04■□□□□ 0.48
CALD1-209ENST00000436461 FSD2A1L4K1 749 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 GTPBP10A4D1E9 387 aaKnown RBP18.03■□□□□ 0.48
CALD1-209ENST00000436461 RAP1GAPP47736 663 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 MYO1EQ12965 1108 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 RAB30Q15771 203 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 UVSSAQ2YD98 709 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 SV2CQ496J9 727 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 FUT10Q6P4F1 479 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 TAS1R1Q7RTX1 841 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 KLHL23Q8NBE8 558 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 KAT5Q92993 513 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 PCMTD1Q96MG8 357 aaPredicted RBP18.03■□□□□ 0.48
CALD1-209ENST00000436461 ARID3AQ99856 593 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 IMPG2Q9BZV3 1241 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 TRIM5Q9C035 493 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 SIX2Q9NPC8 291 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 AAASQ9NRG9 546 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 AJAP1Q9UKB5 411 aaPredicted RBP18.03■□□□□ 0.48
CALD1-209ENST00000436461 SIK3Q9Y2K2 1263 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 PCDHB12Q9Y5F1 795 aa18.03■□□□□ 0.48
CALD1-209ENST00000436461 TMEM189-UBE2V1I3L0A0 370 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 EPHB6O15197 1021 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 FGF18O76093 207 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 ATICP31939 592 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 BMPR1AP36894 532 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 PNPLA4P41247 253 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 ZNF667Q5HYK9 610 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 PHLDB3Q6NSJ2 640 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 DPY19L2P1Q6NXN4 242 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 SARM1Q6SZW1 724 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 DSTYKQ6XUX3 929 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 RRAGAQ7L523 313 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 TMEM169Q96HH4 297 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 SENP8Q96LD8 212 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 MMS19Q96T76 1030 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 SMYD3Q9H7B4 428 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 GRPEL1Q9HAV7 217 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 ALG13Q9NP73 1137 aaKnown RBP18.02■□□□□ 0.48
CALD1-209ENST00000436461 FAM207AQ9NSI2 230 aaPredicted RBP18.02■□□□□ 0.48
CALD1-209ENST00000436461 SPG21Q9NZD8 308 aa18.02■□□□□ 0.48
CALD1-209ENST00000436461 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.02■□□□□ 0.48
CALD1-209ENST00000436461 CYB561D2O14569 222 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 AARSP49588 968 aaKnown RBP eCLIP18.01■□□□□ 0.47
CALD1-209ENST00000436461 CDH8P55286 799 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 SMAD3P84022 425 aaKnown RBP18.01■□□□□ 0.47
CALD1-209ENST00000436461 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 PPM1KQ8N3J5 372 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 CCDC150Q8NCX0 1101 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 TIFAQ96CG3 184 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 ERGIC2Q96RQ1 377 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 TGS1Q96RS0 853 aaKnown RBP18.01■□□□□ 0.47
CALD1-209ENST00000436461 SDCBP2Q9H190 292 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 SLC28A3Q9HAS3 691 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 HCRTO43612 131 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 STAU1O95793 577 aaKnown RBP18.01■□□□□ 0.47
CALD1-209ENST00000436461 TKTP29401 623 aaKnown RBP18.01■□□□□ 0.47
CALD1-209ENST00000436461 ASPAP45381 313 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 TNNC1P63316 161 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 GSE1Q14687 1217 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 FAM171A1Q5VUB5 890 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 CEP57Q86XR8 500 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 ARNTL2Q8WYA1 636 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 NT5C1BQ96P26 610 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 VRTNQ9H8Y1 702 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 L1RE1Q9UN81 338 aa18.01■□□□□ 0.47
CALD1-209ENST00000436461 SF3B1O75533 1304 aaKnown RBP eCLIP18■□□□□ 0.47
CALD1-209ENST00000436461 EPOPA6NHQ4 379 aa18■□□□□ 0.47
CALD1-209ENST00000436461 SOX1O00570 391 aaPredicted RBP18■□□□□ 0.47
CALD1-209ENST00000436461 WEE2P0C1S8 567 aa18■□□□□ 0.47
CALD1-209ENST00000436461 PBX1P40424 430 aa18■□□□□ 0.47
CALD1-209ENST00000436461 ERVK-21P61565 698 aa18■□□□□ 0.47
CALD1-209ENST00000436461 SOWAHAQ2M3V2 549 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms